RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 RPS27AP62979 156 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CDK5Q00535 292 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 IFFO1Q0D2I5 559 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ASAH1Q13510 395 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 GK3PQ14409 553 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 GPR176Q14439 515 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RSU1Q15404 277 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF124Q15973 351 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SSX1Q16384 188 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ACOT6Q3I5F7 207 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 FAM98BQ52LJ0 330 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 NXNL2Q5VZ03 156 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 DMKNQ6E0U4 476 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 GLYATQ6IB77 296 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 FDX2Q6P4F2 183 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 Q6ZRU5 148 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 Q6ZSA8 131 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SSX9Q7RTT3 188 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ARPINQ7Z6K5 226 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CROCCP2Q86T23 111 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 MMD2Q8IY49 270 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 LINC00528Q8N1L1 170 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 LILRB2Q8N423 598 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 PARP16Q8N5Y8 322 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF383Q8NA42 475 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 OR52N1Q8NH53 320 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 VN1R17PQ8TDU5 208 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SRSF12Q8WXF0 261 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 MCUR1Q96AQ8 359 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 OTULINQ96BN8 352 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 DGCR14Q96DF8 476 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RNF125Q96EQ8 232 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ADAT3Q96EY9 351 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 GRAMD2BQ96HH9 432 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 FYTTD1Q96QD9 318 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 OR14A2Q96R54 314 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RNF2Q99496 336 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 PHB2Q99623 299 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 PAIP2Q9BPZ3 127 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 EBF4Q9BQW3 602 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 BTBD10Q9BSF8 475 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RHPN1-AS1Q9BWJ2 59 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 TM2D1Q9BX74 207 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 TEX12Q9BXU0 123 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 KRTAP1-5Q9BYS1 174 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 IFI27L2Q9H2X8 130 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 MED20Q9H944 212 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SEPSECSQ9HD40 501 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 FAM212BQ9NTI7 297 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CLN6Q9NWW5 311 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CMTM6Q9NX76 183 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 FAM30AQ9NZY2 134 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 IKZF2Q9UKS7 526 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RFNGQ9Y644 331 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SELENOKQ9Y6D0 94 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 DNAH8Q96JB1 4490 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 IGLV11-55A0A075B6I3 123 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 TRAV9-2A0A087WT02 112 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 TRAV14DV4A0A0A6YYC5 116 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 IGHV7-4-1A0A0J9YVY3 117 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 RPS10-NUDT3A0A1W2PQS6 291 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 CBY3A6NI87 242 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 LYRM9A8MSI8 78 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 PRR32B1ATL7 298 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 B2RBV5 119 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF670-ZNF695F2Z2N8 137 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 H3BNG1 76 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 DNASE2O00115 360 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-211ENST00000621526 TNFRSF11BO00300 401 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 GEMIN2O14893 280 aaKnown RBP1.62□□□□□ -2.15
CPNE3-211ENST00000621526 ACTL6BO94805 426 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 DIRAS1O95057 198 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 CCNB2O95067 398 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 NUDT3O95989 172 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 APOA2P02652 100 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 MAS1P04201 325 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 OR2T7P0C7T2 308 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 GTF2F2P13984 249 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 ATP6V1B2P21281 511 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 ZBTB25P24278 435 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 MAS1LP35410 378 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 PPP1CCP36873 323 aaKnown RBP1.62□□□□□ -2.15
CPNE3-211ENST00000621526 RBM11P57052 281 aaKnown RBP1.62□□□□□ -2.15
CPNE3-211ENST00000621526 LINC00315P59091 139 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 DAD1P61803 113 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 RPS7P62081 194 aaKnown RBP1.62□□□□□ -2.15
CPNE3-211ENST00000621526 EFNB1P98172 346 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 DEFA5Q01523 94 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 CLINT1Q14677 625 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 GINS1Q14691 196 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 ESRGQ1W209 222 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 PIGYQ3MUY2 71 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 TDRG1Q3Y452 100 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 VMA21Q3ZAQ7 101 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 RPL39P5Q59GN2 51 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 FAM222AQ5U5X8 452 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 GLDNQ6ZMI3 551 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-211ENST00000621526 PLEKHG7Q6ZR37 379 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 ARHGAP24Q8N264 748 aa1.62□□□□□ -2.15
CPNE3-211ENST00000621526 IQCF1Q8N6M8 205 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms