RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 A0A1W2PRV1 198 aa17.66■□□□□ 0.42
LIME1-210ENST00000621325 BAXQ07812 192 aa17.66■□□□□ 0.42
LIME1-210ENST00000621325 LYPD6BQ8NI32 183 aa17.66■□□□□ 0.42
LIME1-210ENST00000621325 WFIKKN1Q96NZ8 548 aa17.66■□□□□ 0.42
LIME1-210ENST00000621325 MMP24Q9Y5R2 645 aa17.66■□□□□ 0.42
LIME1-210ENST00000621325 PRH1P02810 166 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 CAMLGP49069 296 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 LOXL3P58215 753 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 RPL23AP62750 156 aaKnown RBP17.65■□□□□ 0.42
LIME1-210ENST00000621325 RUNX1Q01196 453 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 CATR1Q13166 79 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 GAMTQ14353 236 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 USF2Q15853 346 aaPredicted RBP17.65■□□□□ 0.42
LIME1-210ENST00000621325 MORN2Q502X0 79 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 MIDNQ504T8 468 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 RND1Q92730 232 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 ISOC2Q96AB3 205 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 ATG101Q9BSB4 218 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 KALRNO60229 2985 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 POLEQ07864 2286 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 RELNP78509 3460 aa17.65■□□□□ 0.42
LIME1-210ENST00000621325 MARCH11A6NNE9 402 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 C9JQL5 133 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 HIST1H1BP16401 226 aaKnown RBP17.64■□□□□ 0.42
LIME1-210ENST00000621325 TNFSF4P23510 183 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 ZNF134P52741 427 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 NUTF2P61970 127 aaKnown RBP17.64■□□□□ 0.42
LIME1-210ENST00000621325 CR1LQ2VPA4 569 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 STUMQ69YW2 141 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 CCL13Q99616 98 aa17.64■□□□□ 0.42
LIME1-210ENST00000621325 DYSFO75923 2080 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 GYPAP02724 150 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 PAX6P26367 422 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 RAB5CP51148 216 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 LEAP2Q969E1 77 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 ABHD14AQ9BUJ0 271 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 WSB1Q9Y6I7 421 aa17.64■□□□□ 0.41
LIME1-210ENST00000621325 TRGV8A0A0C4DH27 118 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 P0C879 139 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 FAM216BQ8N7L0 139 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 OR2G3Q8NGZ4 309 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 GAFA1Q96PS6 74 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 C19orf12Q9NSK7 152 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 PSENENQ9NZ42 101 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 ATRXP46100 2492 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 RNASEK-C17orf49H0YIS7 233 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 MT-ND4LP03901 98 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 SNRPCP09234 159 aaKnown RBP17.63■□□□□ 0.41
LIME1-210ENST00000621325 METTL15P1P0C7V9 234 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 SULT1A1P50225 295 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 RBPJQ06330 500 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 ARL16Q0P5N6 197 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 NCR3LG1Q68D85 454 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 SDSLQ96GA7 329 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 CALYQ9NYX4 217 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 JPT1Q9UK76 154 aa17.63■□□□□ 0.41
LIME1-210ENST00000621325 RAI1Q7Z5J4 1906 aaPredicted RBP17.63■□□□□ 0.41
LIME1-210ENST00000621325 A0A1B0GV50 99 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 MSMO1Q15800 293 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 FAM213BQ8TBF2 198 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 Q8TCH9 128 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 TSPAN15O95858 294 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 CGB3P0DN86 165 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 CGB7P0DN87 165 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 GPR12P47775 334 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 C17orf58Q2M2W7 97 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 HAPLN4Q86UW8 402 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 ATP5SQ99766 215 aa17.62■□□□□ 0.41
LIME1-210ENST00000621325 A0A1W2PPH5 198 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 C17orf100A8MU93 164 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 F2RL2O00254 374 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 GNG10P50151 68 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 RPL39P5Q59GN2 51 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 ZNF66Q6ZN08 573 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 DTD1Q8TEA8 209 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 NBASA2RRP1 2371 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 YPEL1O60688 119 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 CLDN14O95500 239 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 CD5P06127 495 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 UBE2KP61086 200 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 TCF23Q7RTU1 214 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 NEUROG1Q92886 237 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 YPEL2Q96QA6 119 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 HSD17B10Q99714 261 aaKnown RBP17.61■□□□□ 0.41
LIME1-210ENST00000621325 VKORC1Q9BQB6 163 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 OR6C3Q9NZP0 311 aa17.61■□□□□ 0.41
LIME1-210ENST00000621325 TNFRSF9Q07011 255 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 SPANXN5Q5MJ07 72 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 FAM234AQ9H0X4 552 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 IFI27L2Q9H2X8 130 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 RBKSQ9H477 322 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 DSCAML1Q8TD84 2053 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 RAB5AP20339 215 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 DUTP33316 252 aaKnown RBP17.6■□□□□ 0.41
LIME1-210ENST00000621325 LBHQ53QV2 105 aaPredicted RBP17.6■□□□□ 0.41
LIME1-210ENST00000621325 ZNF788Q6ZQV5 615 aa17.6■□□□□ 0.41
LIME1-210ENST00000621325 C1orf229Q6ZS94 237 aaPredicted RBP17.6■□□□□ 0.41
LIME1-210ENST00000621325 STRAPQ9Y3F4 350 aaKnown RBP17.6■□□□□ 0.41
LIME1-210ENST00000621325 DOCK11Q5JSL3 2073 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 IRF2P14316 349 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms