RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GNLYP22749 145 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM183BQ1AE95 376 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 SLC35E4Q6ICL7 350 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 KIAA1217Q5T5P2 1943 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 IGKV3D-11A0A0A0MRZ8 115 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 IGLV1-36A0A0B4J1U3 117 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 SRSF10O75494 262 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 GLIPR1P48060 266 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 CEBPEQ15744 281 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM255AQ5JRV8 349 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNF383Q8NA42 475 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 C9orf106Q8NAJ2 232 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 C8orf46Q8TAG6 207 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 CTHRC1Q96CG8 243 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 IMMP1LQ96LU5 166 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNF430Q9H8G1 570 aaPredicted RBP8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 MOB4Q9Y3A3 225 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 SCTP09683 121 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 PRSS22Q9GZN4 317 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 PTBP3O95758 552 aaKnown RBP8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 EFEMP2O95967 443 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 EFNB2P52799 333 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 IGHV2OR16-5A0A0B4J2B6 119 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 CBY3A6NI87 242 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 C19orf67A6NJJ6 358 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 CDRT15L2A8MXV6 281 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 GPX1P07203 203 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 GCSHP23434 173 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 PKIAP61925 76 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.071e-9■■■■■ 35.7
CLTCL1-211ENST00000621271 COX19Q49B96 90 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNRF1Q8ND25 227 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM140Q9NV12 185 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 SEC11BP0C7V7 166 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 FSTP19883 344 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 CCKARP32238 428 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 RTN4RL2Q86UN3 420 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 LDLRAD3Q86YD5 345 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 MYOZ3Q8TDC0 251 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM216AQ8WUB2 273 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 ITLN2Q8WWU7 325 aaPredicted RBP8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 RTN4RQ9BZR6 473 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 PEMTQ9UBM1 199 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 LOC285556D6RIA3 1793 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 C17orf100A8MU93 164 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 C4orf51C9J302 202 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 PDE6DO43924 150 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 DLK1P80370 383 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 PSG9Q00887 426 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 BSXQ3C1V8 233 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 C10orf128Q5T292 105 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 OR2D3Q8NGH3 330 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM54Q969K7 222 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
CLTCL1-211ENST00000621271 H0Y980 276 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 SNRPCP09234 159 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 NANOS3P60323 173 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 ZFP36L1Q07352 338 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 PCM1Q15154 2024 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 CTXND1A0A1B0GTU2 59 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 PAGE4O60829 102 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 THBDP07204 575 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 UMODP07911 640 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM209BQ5JX69 171 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 ZIC4Q8N9L1 334 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 PHLDA3Q9Y5J5 127 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 LOC105371267A0A1B0GV96 52 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 PLAUP00749 431 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 IGKV3-20P01619 116 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 CLDN18P56856 261 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 LRRC75AQ8NAA5 344 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 IGHV3-35A0A0C4DH35 117 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 H3BQ15 152 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 TWIST1Q15672 202 aa8.35□□□□□ -1.07
CLTCL1-211ENST00000621271 MPTX1A8MV57 137 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 M0QZK8 103 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 HTN3P15516 51 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 PXMP4Q9Y6I8 212 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 A0A0G2JMM0 328 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 A0A1W2PPB8 328 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 A0A1W2PRS3 328 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 KIR3DP1A8MWS1 328 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM262E9PQX1 116 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 MPDU1O75352 247 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 IGKV1D-33P01593 117 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 IGKV1-33P01594 117 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 REG1AP05451 166 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 PGA5P0DJD9 388 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 PSMB2P49721 201 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms