RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CMTM1Q8IZ96 169 aa10.85□□□□□ -0.67
NEK3-210ENST00000620675 SPAG16Q8N0X2 631 aa10.85□□□□□ -0.67
NEK3-210ENST00000620675 Q8N9W7 124 aa10.85□□□□□ -0.67
NEK3-210ENST00000620675 JMJD8Q96S16 334 aa10.85□□□□□ -0.67
NEK3-210ENST00000620675 PRR13Q9NZ81 148 aa10.85□□□□□ -0.67
NEK3-210ENST00000620675 SIGLEC9Q9Y336 463 aa10.85□□□□□ -0.67
NEK3-210ENST00000620675 NCBP2LA6PVI3 153 aaKnown RBP10.84□□□□□ -0.67
NEK3-210ENST00000620675 MPPED1O15442 326 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 RPA2P15927 270 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 F2RP25116 425 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 MC5RP33032 325 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 RPS16P62249 146 aaKnown RBP10.84□□□□□ -0.67
NEK3-210ENST00000620675 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 SP6Q3SY56 376 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 ABCA11PQ4W5N1 156 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 LPCAT3Q6P1A2 487 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 PDPNQ86YL7 162 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 DEDD2Q8WXF8 326 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 FLYWCH2Q96CP2 140 aaKnown RBP10.84□□□□□ -0.67
NEK3-210ENST00000620675 ADTRPQ96IZ2 230 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 C1RLQ9NZP8 487 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 PITPNC1Q9UKF7 332 aa10.84□□□□□ -0.67
NEK3-210ENST00000620675 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 S1PR2O95136 353 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 ASAH1Q13510 395 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 Q6ZSV7 163 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 TMED4Q7Z7H5 227 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 FAM71E2Q8N5Q1 922 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 C5orf56Q8N8D9 126 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 ZFAND1Q8TCF1 268 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 NAP1L6A6NFF2 107 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 SLC25A17O43808 307 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 IGKV1-39P01597 117 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 IGKV1D-39P04432 117 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 SLC6A1P30531 599 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 RND3P61587 244 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
NEK3-210ENST00000620675 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 RTL8BQ17RB0 113 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 DHRS7BQ6IAN0 325 aaPredicted RBP10.83□□□□□ -0.68
NEK3-210ENST00000620675 C11orf88Q6PI97 169 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 OR4C13Q8NGP0 309 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 C7orf50Q9BRJ6 194 aaKnown RBP10.83□□□□□ -0.68
NEK3-210ENST00000620675 COPZ2Q9P299 210 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 MOB4Q9Y3A3 225 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 PRELID3BQ9Y3B1 194 aa10.83□□□□□ -0.68
NEK3-210ENST00000620675 CENPXA8MT69 81 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 FCN1O00602 326 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 SHOXO15266 292 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 NBR2O15453 112 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 NDUFB6O95139 128 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 AKR1C4P17516 323 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 SUPT4H1P63272 117 aaKnown RBP10.82□□□□□ -0.68
NEK3-210ENST00000620675 CATR1Q13166 79 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 PSG5Q15238 335 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 RBMS2Q15434 407 aaKnown RBP10.82□□□□□ -0.68
NEK3-210ENST00000620675 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
NEK3-210ENST00000620675 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 SSX9Q7RTT3 188 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
NEK3-210ENST00000620675 HSPB9Q9BQS6 159 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 ZNF702PQ9H963 129 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 BEX1Q9HBH7 125 aa10.82□□□□□ -0.68
NEK3-210ENST00000620675 C14orf166Q9Y224 244 aaKnown RBP10.82□□□□□ -0.68
NEK3-210ENST00000620675 ARPC1BO15143 372 aaKnown RBP10.81□□□□□ -0.68
NEK3-210ENST00000620675 NDUFA3O95167 84 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 OR5AC1P0C628 307 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 NPBQ8NG41 125 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 CLCC1Q96S66 551 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 VWFP04275 2813 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 TRRAPQ9Y4A5 3859 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 CRYM-AS1A6NIL9 109 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 RRHO14718 337 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 ANXA7P20073 488 aaKnown RBP10.81□□□□□ -0.68
NEK3-210ENST00000620675 LPAR6P43657 344 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 NRARPQ7Z6K4 114 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 OR4S2Q8NH73 311 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 BORCS5Q969J3 196 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
NEK3-210ENST00000620675 NAA60Q9H7X0 242 aa10.81□□□□□ -0.68
NEK3-210ENST00000620675 TRAV6A0A075B6T7 132 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 C3orf85A0A1B0GTC6 90 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 TCRBP04435 133 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 CRYGBP07316 175 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 SAA1P0DJI8 122 aaPredicted RBP10.8□□□□□ -0.68
NEK3-210ENST00000620675 SPNP16150 400 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 ECI1P42126 302 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 SSBP2P81877 361 aaPredicted RBP10.8□□□□□ -0.68
NEK3-210ENST00000620675 NDPQ00604 133 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 C9orf152Q5JTZ5 239 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 POC5Q8NA72 575 aa10.8□□□□□ -0.68
NEK3-210ENST00000620675 GLYATL2Q8WU03 294 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms