RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 NARS2Q96I59 477 aaKnown RBP17.71■□□□□ 0.42
SGMS1-210ENST00000619438 MAGT1Q9H0U3 335 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 HRH4Q9H3N8 390 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 TMEM160Q9NX00 188 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 METRNQ9UJH8 293 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 CARHSP1Q9Y2V2 147 aaKnown RBP17.71■□□□□ 0.42
SGMS1-210ENST00000619438 DYSFO75923 2080 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 WRBO00258 174 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 CHST1O43916 411 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 ATG12O94817 140 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 CYB5R3P00387 301 aaPredicted RBP17.7■□□□□ 0.42
SGMS1-210ENST00000619438 LHBP01229 141 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 CR1LQ2VPA4 569 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 Q6ZRG5 221 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 PPP1R35Q8TAP8 253 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 UBALD1Q8TB05 177 aa17.7■□□□□ 0.42
SGMS1-210ENST00000619438 TSNAXQ99598 290 aaKnown RBP17.7■□□□□ 0.42
SGMS1-210ENST00000619438 CUBNO60494 3623 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 IGKV1-5P01602 117 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 MSMBP08118 114 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 EGR1P18146 543 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 HNF1AP20823 631 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 GLIPR1P48060 266 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 KRTAP21-3Q3LHN1 58 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 ODF3L1Q8IXM7 274 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 GCSAMQ8N6F7 178 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 SNX22Q96L94 193 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 MS4A7Q9GZW8 240 aaPredicted RBP17.69■□□□□ 0.42
SGMS1-210ENST00000619438 NCOR1P1Q9H4R4 102 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 COA4Q9NYJ1 87 aa17.69■□□□□ 0.42
SGMS1-210ENST00000619438 IGKV1D-17A0A075B6S4 117 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 TRIM77I1YAP6 450 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 IGHV2-70P01814 119 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 IGHV2-5P01817 119 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 DVL1P1P54792 670 aaPredicted RBP17.68■□□□□ 0.42
SGMS1-210ENST00000619438 HOXA4Q00056 320 aaPredicted RBP17.68■□□□□ 0.42
SGMS1-210ENST00000619438 FAM120AOSQ5T036 256 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 OR52L2PQ8NGH6 319 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 MRGPRDQ8TDS7 321 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 TMEM186Q96B77 213 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 UQCC1Q9NVA1 299 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 HIF1ANQ9NWT6 349 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 CACFD1Q9UGQ2 172 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 WSB1Q9Y6I7 421 aa17.68■□□□□ 0.42
SGMS1-210ENST00000619438 FAM90A26D6RGX4 464 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 C15orf65H3BRN8 121 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 MGST3O14880 152 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 CD5P06127 495 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 GZMHP20718 246 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 RPL23AP62750 156 aaKnown RBP17.67■□□□□ 0.42
SGMS1-210ENST00000619438 BTN1A1Q13410 526 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 Q6ZRM9 215 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 OR13A1Q8NGR1 328 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 RNASE11Q8TAA1 199 aaKnown RBP17.67■□□□□ 0.42
SGMS1-210ENST00000619438 SEC11CQ9BY50 192 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.67■□□□□ 0.428e-12■■■■■ 44.3
SGMS1-210ENST00000619438 SPINT2O43291 252 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 AKR1C2P52895 323 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 TAS2R30P59541 319 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 SRSF3P84103 164 aaKnown RBP17.67■□□□□ 0.42
SGMS1-210ENST00000619438 CATR1Q13166 79 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 OR2D2Q9H210 308 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 CACNG5Q9UF02 275 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 MMP24Q9Y5R2 645 aa17.67■□□□□ 0.42
SGMS1-210ENST00000619438 PPIAL4EA0A075B759 164 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 UMAD1C9J7I0 102 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 PPIAL4DF5H284 164 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 TXNL1O43396 289 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 PPIAL4FP0DN26 164 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 ADCYAP1P18509 176 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 EPHA1P21709 976 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 DEFA5Q01523 94 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 TMEM155Q4W5P6 130 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 IL17RELQ6ZVW7 336 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 SVBPQ8N300 66 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 C17orf50Q8WW18 174 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 PPIAL4AQ9Y536 164 aa17.66■□□□□ 0.42
SGMS1-210ENST00000619438 TFF1P04155 84 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 MUC1P15941 1255 aaPredicted RBP17.65■□□□□ 0.42
SGMS1-210ENST00000619438 ATRAIDQ6UW56 229 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 ZNF66Q6ZN08 573 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 PRIMA1Q86XR5 153 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 OR5C1Q8NGR4 320 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 C5orf30Q96GV9 206 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 TREM1Q9NP99 234 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 RNF7Q9UBF6 113 aa17.65■□□□□ 0.42
SGMS1-210ENST00000619438 MXRA5Q9NR99 2828 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 TRAV20A0A0B4J274 112 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 ODAMA1E959 279 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 RNASEK-C17orf49H0YIS7 233 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 TOR1AO14656 332 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 SYNGR2O43760 224 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 DFFBO76075 338 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 P0C879 139 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 SSTR5P35346 364 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 DYNLT3P51808 116 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 AKR1C1Q04828 323 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 ZNF273Q14593 569 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 FAM201AQ5SY85 155 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 STX12Q86Y82 276 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms