RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 H2BFWTQ7Z2G1 175 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 HAPLN4Q86UW8 402 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 CD300LFQ8TDQ1 290 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 SNX22Q96L94 193 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 ZNRD1Q9P1U0 126 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 SPTAN1Q13813 2472 aaKnown RBP10.3□□□□□ -0.76
CIITA-212ENST00000618207 NUDT19A8MXV4 375 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 OR4A8P0C604 315 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 DAOP14920 347 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 ELLP55199 621 aaPredicted RBP10.3□□□□□ -0.76
CIITA-212ENST00000618207 MORN2Q502X0 79 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 PPP1R35Q8TAP8 253 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 DTD1Q8TEA8 209 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 NEUROG1Q92886 237 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 RNF7Q9UBF6 113 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 MMP24Q9Y5R2 645 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 WSB1Q9Y6I7 421 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 MED13LQ71F56 2210 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 TRGV8A0A0C4DH27 118 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 UBE2L5PA0A1B0GUS4 154 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 M0R036 132 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 TCAPO15273 167 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 HMGB3O15347 200 aaKnown RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 TMPRSS2O15393 492 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 TNFRSF9Q07011 255 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 BAXQ07812 192 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 SCGB1C1Q8TD33 95 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 K7ENP7 123 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 SNRNP70P08621 437 aaKnown RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 GZMHP20718 246 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 RPS23P62266 143 aaKnown RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 MRGPRGQ86SM5 289 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 C1orf174Q8IYL3 243 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 CALYQ9NYX4 217 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 CARHSP1Q9Y2V2 147 aaKnown RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 TET2Q6N021 2002 aaPredicted RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 MARCH11A6NNE9 402 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 CEBPZOSA8MTT3 80 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 LY86O95711 162 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 THBDP07204 575 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 LCN15Q6UWW0 184 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 C1orf229Q6ZS94 237 aaPredicted RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 CCL17Q92583 94 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 OR4C12Q96R67 309 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 RPS10P5Q9NQ39 176 aa10.29□□□□□ -0.76
CIITA-212ENST00000618207 STRAPQ9Y3F4 350 aaKnown RBP10.29□□□□□ -0.76
CIITA-212ENST00000618207 LRRC30A6NM36 301 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 LHBP01229 141 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 MMP9P14780 707 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 RBMS3Q6XE24 437 aaKnown RBP10.28□□□□□ -0.76
CIITA-212ENST00000618207 LYPD6BQ8NI32 183 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 RAXQ9Y2V3 346 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 FAM157AC9JC47 383 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 MMP23AO75900 390 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 IFNA17P01571 189 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 ADH4P08319 380 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 SLC25A6P12236 298 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 IRF2P14316 349 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 TNFSF4P23510 183 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 RAB5CP51148 216 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 TAS2R30P59541 319 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 PEA15Q15121 130 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 MSMO1Q15800 293 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 ADIPOQQ15848 244 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 RNF212Q495C1 297 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 R3HDM4Q96D70 268 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 WFIKKN1Q96NZ8 548 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 IL19Q9UHD0 177 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 DCHS2Q6V1P9 2916 aa10.28□□□□□ -0.76
CIITA-212ENST00000618207 DFFBO76075 338 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 OR9G9P0C7N8 305 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 DUTP33316 252 aaKnown RBP10.27□□□□□ -0.77
CIITA-212ENST00000618207 SLC38A11Q08AI6 406 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 EIF4EBP1Q13541 118 aaPredicted RBP10.27□□□□□ -0.77
CIITA-212ENST00000618207 TMEM95Q3KNT9 176 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 LYG1Q8N1E2 194 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 ZNF525Q8N782 197 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 ZBTB34Q8NCN2 500 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 GNPNAT1Q96EK6 184 aaPredicted RBP10.27□□□□□ -0.77
CIITA-212ENST00000618207 SEBOXQ9HB31 216 aaPredicted RBP10.27□□□□□ -0.77
CIITA-212ENST00000618207 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.27□□□□□ -0.77
CIITA-212ENST00000618207 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
CIITA-212ENST00000618207 UMAD1C9J7I0 102 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 GFRA3O60609 400 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 DEFA4P12838 97 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 LOXL3P58215 753 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 HTD2P86397 168 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 SPSB3Q6PJ21 355 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 RXFP4Q8TDU9 374 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 ISOC2Q96AB3 205 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 C14orf144Q96I85 54 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 SCRT1Q9BWW7 348 aa10.27□□□□□ -0.77
CIITA-212ENST00000618207 QTRT1Q9BXR0 403 aaKnown RBP10.27□□□□□ -0.77
CIITA-212ENST00000618207 RPRMQ9NS64 109 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms