RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 KLF4O43474 513 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MPV17P39210 176 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 CD69Q07108 199 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 GCSAMQ8N6F7 178 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 TMEM252Q8N6L7 170 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 ZNF385AQ96PM9 386 aaKnown RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 PLSCR2Q9NRY7 297 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 IGHV3OR16-8A0A075B7F1 116 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 A0A1W2PRX2 142 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 ZG16O60844 167 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 SCTP09683 121 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 CXCL2P19875 107 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 C1orf185Q5T7R7 199 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 KIR3DL3Q8N743 410 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 TAF15Q92804 592 aaKnown RBP eCLIP5.17□□□□□ -1.58
RFX3-212ENST00000617270 CISD1Q9NZ45 108 aaKnown RBP5.17□□□□□ -1.58
RFX3-212ENST00000617270 BGLAPP02818 100 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 A0A1W2PQD3 144 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 PROB1E7EW31 1015 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 UPK3AO75631 287 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 LIPFP07098 398 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 C8orf88P0DMB2 117 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 CEACAM21Q3KPI0 293 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 SPSB4Q96A44 273 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 RPP25Q9BUL9 199 aaKnown RBP5.17□□□□□ -1.58
RFX3-212ENST00000617270 LRP6O75581 1613 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 APOHP02749 345 aaPredicted RBP5.17□□□□□ -1.58
RFX3-212ENST00000617270 CENPWQ5EE01 88 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 OR51G1Q8NGK1 321 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 EEF1AKMT3Q96AZ1 226 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 AICDAQ9GZX7 198 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 MEGF9Q9H1U4 602 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 ST6GALNAC2Q9UJ37 374 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 H3BUT2 72 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 TCF23Q7RTU1 214 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 NIT1Q86X76 327 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 OR2K2Q8NGT1 345 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 DPRXA6NFQ7 191 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 COL9A1P20849 921 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 RNASE4P34096 147 aaKnown RBP5.17□□□□□ -1.58
RFX3-212ENST00000617270 TFF2Q03403 129 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
RFX3-212ENST00000617270 RFLNBQ8N5W9 214 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 SMDT1Q9H4I9 107 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 CALYQ9NYX4 217 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 KLHDC2Q9Y2U9 406 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 AKAP12Q02952 1782 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 TRAV30A0A087WSZ9 112 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 PPIAL4CA0A0B4J2A2 164 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 IGHV1OR15-9A0A0B4J2B8 117 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 PPIAL4GP0DN37 164 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 FHITP49789 147 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 EDA2RQ9HAV5 297 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 SEMA5BQ9P283 1151 aa5.17□□□□□ -1.58
RFX3-212ENST00000617270 PLA2G10O15496 165 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 TMEM249Q2WGJ8 235 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 ZAR1Q86SH2 424 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 PNKDQ8N490 385 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 SHROOM3Q8TF72 1996 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 FMN2Q9NZ56 1722 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 UCP2P55851 309 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 GFI1BQ5VTD9 330 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 WDR82Q6UXN9 313 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 C9orf40Q8IXQ3 194 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 NEUROG1Q92886 237 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 WDR34Q96EX3 536 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 NPIPB11E5RHQ5 1161 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 NPIPB8E9PQR5 432 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 NPIPB9F8W1W9 429 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 NPIPB7O75200 414 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 FOXL2P58012 376 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 RND3P61587 244 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 TMEM42Q69YG0 159 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 LINC00305Q7Z4B0 112 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 LINC01587Q99440 93 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 SLC25A15Q9Y619 301 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 IFT172Q9UG01 1749 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 C7orf66A4D0T2 115 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 GPR183P32249 361 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 NOVP48745 357 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 FAM89BQ8N5H3 189 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 CCL19Q99731 98 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 C21orf140B9A014 251 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 TRGV3P03979 118 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 ASAH2BP0C7U1 165 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 RPL34P49207 117 aaKnown RBP5.16□□□□□ -1.58
RFX3-212ENST00000617270 PCSK4Q6UW60 755 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 TEX29Q8N6K0 151 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 OR4D11Q8NGI4 311 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 DMRT1Q9Y5R6 373 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 LAMB4A4D0S4 1761 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 PCM1Q15154 2024 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 PGLYRP1O75594 196 aaPredicted RBP5.16□□□□□ -1.58
RFX3-212ENST00000617270 DXOO77932 396 aaKnown RBP5.16□□□□□ -1.58
RFX3-212ENST00000617270 CRPP02741 224 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 LEPP41159 167 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 TSPAN7P41732 249 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 HMGA2P52926 109 aa5.16□□□□□ -1.58
RFX3-212ENST00000617270 ZNF79Q15937 498 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms