RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RANBP3Q9H6Z4 567 aaPredicted RBP11.88□□□□□ -0.51
UBXN1-218ENST00000616865 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
UBXN1-218ENST00000616865 FAM240BA0A1B0GVZ2 78 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 H7C2Y5 167 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 GNRHRP30968 328 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 CATR1Q13166 79 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 HES1Q14469 280 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 RBMS2Q15434 407 aaKnown RBP11.87□□□□□ -0.51
UBXN1-218ENST00000616865 SURF2Q15527 256 aaPredicted RBP11.87□□□□□ -0.51
UBXN1-218ENST00000616865 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 ZNF818PQ6ZRF7 136 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 KCTD9Q7L273 389 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 KLHDC1Q8N7A1 406 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 ENKURQ8TC29 256 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 ZNF486Q96H40 463 aaPredicted RBP11.87□□□□□ -0.51
UBXN1-218ENST00000616865 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 COPZ2Q9P299 210 aa11.87□□□□□ -0.51
UBXN1-218ENST00000616865 KMT2CQ8NEZ4 4911 aaKnown RBP11.86□□□□□ -0.51
UBXN1-218ENST00000616865 IGHV3-72A0A0B4J1Y9 119 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 RLN1P04808 185 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 CTSDP07339 412 aaPredicted RBP11.86□□□□□ -0.51
UBXN1-218ENST00000616865 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 PI3P19957 117 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 MC5RP33032 325 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 RAB13P51153 203 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 IFITM3Q01628 133 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 TAGLNQ01995 201 aaKnown RBP11.86□□□□□ -0.51
UBXN1-218ENST00000616865 DCTN2Q13561 401 aaKnown RBP11.86□□□□□ -0.51
UBXN1-218ENST00000616865 LY6EQ16553 131 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 RTL8BQ17RB0 113 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
UBXN1-218ENST00000616865 BVESQ8NE79 360 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 OR51H1Q8NH63 302 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 PALMDQ9NP74 551 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 TBC1D24Q9ULP9 559 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 DNAH3Q8TD57 4116 aa11.86□□□□□ -0.51
UBXN1-218ENST00000616865 TEX13DA0A0J9YY54 714 aaPredicted RBP11.85□□□□□ -0.51
UBXN1-218ENST00000616865 CT45A6P0DMU7 189 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 CT45A5P0DMU8 189 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 CT45A7P0DMV0 189 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 RRASP10301 218 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 CD1BP29016 333 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 DUTP33316 252 aaKnown RBP11.85□□□□□ -0.51
UBXN1-218ENST00000616865 PIGPP57054 158 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 AANATQ16613 207 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 OR2B11Q5JQS5 317 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 TMED4Q7Z7H5 227 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 C5orf30Q96GV9 206 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 PITPNC1Q9UKF7 332 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 WASHC3Q9Y3C0 194 aa11.85□□□□□ -0.51
UBXN1-218ENST00000616865 VGLL3A8MV65 326 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 PROP1O75360 226 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
UBXN1-218ENST00000616865 NDUFB6O95139 128 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 IGLV2-14P01704 120 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 SNRNP70P08621 437 aaKnown RBP11.84□□□□□ -0.51
UBXN1-218ENST00000616865 AKR1C4P17516 323 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 CD24P25063 80 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 DYNLT3P51808 116 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 ZNF383Q8NA42 475 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 OR2T10Q8NGZ9 312 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 MRAPQ8TCY5 172 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 GPHA2Q96T91 129 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 NPFFR1Q9GZQ6 430 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 LIN7CQ9NUP9 197 aaKnown RBP11.84□□□□□ -0.51
UBXN1-218ENST00000616865 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
UBXN1-218ENST00000616865 H0YJW9 148 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 MPPED1O15442 326 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 CHST1O43916 411 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 FCGR3BO75015 233 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 MOSP00540 346 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 IGKV1D-33P01593 117 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 IGKV1-33P01594 117 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 TMEM11P17152 192 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 BTCP35070 178 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 TAS2R31P59538 309 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 RND3P61587 244 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
UBXN1-218ENST00000616865 HNF4GQ14541 408 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 LIAT1Q6ZQX7 453 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 PDPNQ86YL7 162 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 SGPP2Q8IWX5 399 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 CENPSQ8N2Z9 138 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 OR5AN1Q8NGI8 311 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 MRGPRFQ96AM1 343 aa11.83□□□□□ -0.52
UBXN1-218ENST00000616865 LINC00473A8K010 186 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 ARPC1BO15143 372 aaKnown RBP11.82□□□□□ -0.52
UBXN1-218ENST00000616865 TCRBP04435 133 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 VSIG10L2P0DP72 767 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 SLC6A1P30531 599 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms