RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 TNXAQ16473 311 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 IGLV3-1P01715 115 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 FBP1P09467 338 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 APELAP0DMC3 54 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 FAM216BQ8N7L0 139 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 IDI2-AS1Q9NZ38 188 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 SLC45A2Q9UMX9 530 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
PPP4R3B-206ENST00000616407 CEACAM18A8MTB9 384 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 FGF16O43320 207 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 TGOLN2O43493 480 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 IGHG3P01860 377 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 UCNP55089 124 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 ID3Q02535 119 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 OR10J4P0C629 311 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 GALR1P47211 349 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 ASCL5Q7RTU5 278 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 NCBP2LA6PVI3 153 aaKnown RBP11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 S100A8P05109 93 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 SSX8Q7RTT4 187 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 NPVFQ9HCQ7 196 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 AURKAIP1Q9NWT8 199 aaPredicted RBP11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 MUC6Q6W4X9 2439 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 FABP1P07148 127 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF146Q15072 292 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 WFDC1Q9HC57 220 aa11.09□□□□□ -0.63
PPP4R3B-206ENST00000616407 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 GFRA3O60609 400 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 TMPRSS3P57727 454 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 C20orf204Q6ZNR8 217 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 CYYR1Q96J86 154 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 A0A1W2PN81 502 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 CHRNB4P30926 498 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 BORCS7Q96B45 105 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 MRPL37Q9BZE1 423 aaKnown RBP11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 SCGB1D1O95968 90 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 MYPOPQ86VE0 399 aaPredicted RBP11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 DTX1Q86Y01 620 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 LYPD6Q86Y78 171 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 REG4Q9BYZ8 158 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 LIME1Q9H400 295 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZNF835Q9Y2P0 537 aa11.08□□□□□ -0.64
PPP4R3B-206ENST00000616407 RAMP3O60896 148 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 RBP4P02753 201 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ORM2P19652 201 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 BSPH1Q075Z2 132 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 PSG5Q15238 335 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR8B3Q8NGG8 313 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 OR8B2Q96RD0 313 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ADAMTS9Q9P2N4 1935 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 HSPE1P61604 102 aaKnown RBP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 GNB2P62879 340 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ACSM6Q6P461 480 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 LINC01560Q8TB33 94 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 TMEM204Q9BSN7 226 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 PXMP4Q9Y6I8 212 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 FAM157AC9JC47 383 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 DVL1O14640 695 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 GTF3C1Q12789 2109 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZNF331Q9NQX6 463 aaPredicted RBP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ELOVL5Q9NYP7 299 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 C5orf42Q9H799 3197 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZNF729A6NN14 1252 aaPredicted RBP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 HERPUD1Q15011 391 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 MIC13Q5XKP0 118 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 ZNF880Q6PDB4 577 aa11.07□□□□□ -0.64
PPP4R3B-206ENST00000616407 NUBP1P53384 320 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 SSTP61278 116 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 CARHSP1Q9Y2V2 147 aaKnown RBP11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
PPP4R3B-206ENST00000616407 B4DEV8 164 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms