RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FGL1Q08830 312 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 PPP1R1AQ13522 171 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 EDDM3AQ14507 147 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 IGSF11Q5DX21 431 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 ZNF660Q6AZW8 331 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 CASTOR1Q8WTX7 329 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 CAPSLQ8WWF8 208 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 ST6GAL2Q96JF0 529 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 HYLS1Q96M11 299 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 ASCL2Q99929 193 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 PDCD10Q9BUL8 212 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 SLC5A7Q9GZV3 580 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 C5orf66Q9H5L9 145 aa14.02□□□□□ -0.17
TRAPPC3-209ENST00000616395 GPR31O00270 319 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 GOSR2O14653 212 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 IFNA21P01568 189 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 C4BPBP20851 252 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 AADACP22760 399 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 NFYAP23511 347 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 LGALS4P56470 323 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 LHFPL4Q7Z7J7 247 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 PRR18Q8N4B5 295 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR52B4Q8NGK2 314 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 EDARADDQ8WWZ3 215 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 AKR1E2Q96JD6 320 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 RSRP1Q9BUV0 290 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 COMMD9Q9P000 198 aa14.01□□□□□ -0.17
TRAPPC3-209ENST00000616395 ODAMA1E959 279 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 ZNF737O75373 536 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 C1QBP02746 253 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 COX7A1P24310 79 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 PIGPP57054 158 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 KCTD9Q7L273 389 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 CENPVQ7Z7K6 275 aaPredicted RBP14□□□□□ -0.17
TRAPPC3-209ENST00000616395 NOXA1Q86UR1 476 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 H1FOOQ8IZA3 346 aaPredicted RBP14□□□□□ -0.17
TRAPPC3-209ENST00000616395 ADAD2Q8NCV1 583 aaKnown RBP14□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR11H7Q8NGC8 314 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 SECTM1Q8WVN6 248 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 ARL11Q969Q4 196 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 MRGPRFQ96AM1 343 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 RTBDNQ9BSG5 229 aaPredicted RBP14□□□□□ -0.17
TRAPPC3-209ENST00000616395 FXYD6Q9H0Q3 95 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 DSCAML1Q8TD84 2053 aa14□□□□□ -0.17
TRAPPC3-209ENST00000616395 hADV38S2A0JD32 116 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 CRYM-AS1A6NIL9 109 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 F2RL2O00254 374 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 TUSC2O75896 110 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 CEACAM6P40199 344 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 RND3P61587 244 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 HTD2P86397 168 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 GSG1LQ6UXU4 331 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 MRPL41Q8IXM3 137 aaKnown RBP13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 ZBTB34Q8NCN2 500 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR10V1Q8NGI7 309 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 MRGPRDQ8TDS7 321 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 RTN4IP1Q8WWV3 396 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 COQ2Q96H96 371 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 HEXA-AS1Q9H8Q6 139 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 PITPNC1Q9UKF7 332 aa13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 LSM4Q9Y4Z0 139 aaKnown RBP13.99□□□□□ -0.17
TRAPPC3-209ENST00000616395 A0A1W2PPH5 198 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 HBZP02008 142 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 CCL3L1P16619 93 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 GLIPR1P48060 266 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 ERVFRD-1P60508 538 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 MEF2CQ06413 473 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 ZNF273Q14593 569 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 KHDC1LQ5JSQ8 128 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 GAL3ST2Q9H3Q3 398 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 NAA60Q9H7X0 242 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 SLC2A9Q9NRM0 540 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 JPT1Q9UK76 154 aa13.98□□□□□ -0.17
TRAPPC3-209ENST00000616395 C12orf77C9JDV5 145 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 HLA-GP17693 338 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 PI3P19957 117 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 RPL31P62899 125 aaKnown RBP13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 MSMO1Q15800 293 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 ETV3LQ6ZN32 361 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 LGI3Q8N145 548 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 C11orf42Q8N5U0 333 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR5M8Q8NGP6 311 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR2T35Q8NGX2 323 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 FYTTD1Q96QD9 318 aaKnown RBP13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 RDH8Q9NYR8 311 aa13.97□□□□□ -0.17
TRAPPC3-209ENST00000616395 C5orf51A6NDU8 294 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 ZNF729A6NN14 1252 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR2A4O95047 310 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 LYL1P12980 280 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 TMEM200BQ69YZ2 307 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 TPRX1Q8N7U7 411 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR2A7Q96R45 310 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 OR2S2Q9NQN1 319 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 TAS2R3Q9NYW6 316 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 GNG12Q9UBI6 72 aa13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 UBE2J1Q9Y385 318 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC3-209ENST00000616395 LYSTQ99698 3801 aa13.96□□□□□ -0.18
TRAPPC3-209ENST00000616395 DNAH7Q8WXX0 4024 aa13.95□□□□□ -0.18
TRAPPC3-209ENST00000616395 FAM25EA8MYX2 175 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms