RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 CD5P06127 495 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 PMCHP20382 165 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 GNB1P62873 340 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 MEF2BQ02080 365 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-220ENST00000615665 VMA21Q3ZAQ7 101 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 KRTCAP3Q53RY4 240 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 OR13A1Q8NGR1 328 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-220ENST00000615665 TMEM11P17152 192 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 MYPOPQ86VE0 399 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-220ENST00000615665 BARX1Q9HBU1 254 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-220ENST00000615665 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
SSBP2-220ENST00000615665 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 RCC1LQ96I51 464 aaKnown RBP11.83□□□□□ -0.52
SSBP2-220ENST00000615665 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
SSBP2-220ENST00000615665 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 CNIH1O95406 144 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 GYPAP02724 150 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 BPIFB3P59826 476 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 TIMM23BQ5SRD1 257 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 PRR27Q6MZM9 219 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 P2RX4Q99571 388 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 B2MP61769 119 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 ZNRF1Q8ND25 227 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 TIMD4Q96H15 378 aa11.83□□□□□ -0.52
SSBP2-220ENST00000615665 PACRGQ96M98 296 aaPredicted RBP11.83□□□□□ -0.52
SSBP2-220ENST00000615665 LOC102723971A0A1B0GUV8 181 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 CYB5R3P00387 301 aaPredicted RBP11.82□□□□□ -0.52
SSBP2-220ENST00000615665 DEFA4P12838 97 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 ZNF25P17030 456 aaPredicted RBP11.82□□□□□ -0.52
SSBP2-220ENST00000615665 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 MS4A10Q96PG2 267 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 NCOA6Q14686 2063 aaPredicted RBP11.82□□□□□ -0.52
SSBP2-220ENST00000615665 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 CT45A6P0DMU7 189 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 CT45A5P0DMU8 189 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 CT45A7P0DMV0 189 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 GLRXP35754 106 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 CT45A1Q5HYN5 189 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 ZNF525Q8N782 197 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 CT45A3Q8NHU0 189 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 DCTN5Q9BTE1 182 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 SEC14L6B5MCN3 397 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 SRP19P09132 144 aaKnown RBP11.82□□□□□ -0.52
SSBP2-220ENST00000615665 HERPUD1Q15011 391 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 ZNF146Q15072 292 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 HFEQ30201 348 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
SSBP2-220ENST00000615665 TEPPQ6URK8 271 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 WDR82Q6UXN9 313 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 OR10A7Q8NGE5 316 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 OR2T10Q8NGZ9 312 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
SSBP2-220ENST00000615665 MPDU1O75352 247 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 HES1Q14469 280 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 CYYR1Q96J86 154 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 CBY1Q9Y3M2 126 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 J3QR06 171 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 PDE6DO43924 150 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 TDGF1P13385 188 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 OPRK1P41145 380 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 RND1Q92730 232 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 GPR61Q9BZJ8 451 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 SLC25A10Q9UBX3 287 aaPredicted RBP11.81□□□□□ -0.52
SSBP2-220ENST00000615665 KIAA2026Q5HYC2 2103 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 TFF1P04155 84 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 ADCYAP1P18509 176 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 FAM78BQ5VT40 261 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 HARBI1Q96MB7 349 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 SLX1AQ9BQ83 275 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 ZDHHC8Q9ULC8 765 aa11.81□□□□□ -0.52
SSBP2-220ENST00000615665 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 LINC00587B1AMM8 73 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
SSBP2-220ENST00000615665 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 UBE2G1P62253 170 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 MOB3BQ86TA1 216 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 KDF1Q8NAX2 398 aaPredicted RBP11.8□□□□□ -0.52
SSBP2-220ENST00000615665 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 NPVFQ9HCQ7 196 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 ZNF331Q9NQX6 463 aaPredicted RBP11.8□□□□□ -0.52
SSBP2-220ENST00000615665 OR51B2Q9Y5P1 312 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 TRAPPC1Q9Y5R8 145 aa11.8□□□□□ -0.52
SSBP2-220ENST00000615665 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms