RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 GNPNAT1Q96EK6 184 aaPredicted RBP8.38□□□□□ -1.07
GGA3-221ENST00000614198 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 PECRQ9BY49 303 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 RHBDL1O75783 438 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 NKX2-1P43699 371 aaPredicted RBP8.38□□□□□ -1.07
GGA3-221ENST00000614198 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 TGFBR3Q03167 851 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 GBGT1Q8N5D6 347 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 TUBG2Q9NRH3 451 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 NKX2-6A6NCS4 301 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
GGA3-221ENST00000614198 SYNGR1O43759 233 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 TESK1Q15569 626 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 CST9LP1Q5W188 147 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 ZCCHC24Q8N2G6 241 aaKnown RBP8.38□□□□□ -1.07
GGA3-221ENST00000614198 RPUSD4Q96CM3 377 aaKnown RBP8.38□□□□□ -1.07
GGA3-221ENST00000614198 OR5B12Q96R08 314 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 C20orf144Q9BQM9 153 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 NAA60Q9H7X0 242 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 GP6Q9HCN6 339 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 GLRX2Q9NS18 164 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 CISD1Q9NZ45 108 aaKnown RBP8.38□□□□□ -1.07
GGA3-221ENST00000614198 CD300LBA8K4G0 201 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 UQCRFS1P47985 274 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 FAM3BP58499 235 aaPredicted RBP8.37□□□□□ -1.07
GGA3-221ENST00000614198 PSG7Q13046 419 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 OR8B8Q15620 311 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 NRN1LQ496H8 165 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 APOBEC3DQ96AK3 386 aaPredicted RBP8.37□□□□□ -1.07
GGA3-221ENST00000614198 FOXI3A8MTJ6 420 aaPredicted RBP8.37□□□□□ -1.07
GGA3-221ENST00000614198 A8MXE2 369 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 MSTNO14793 375 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 ARL6IP1Q15041 203 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 ACOT6Q3I5F7 207 aaPredicted RBP8.37□□□□□ -1.07
GGA3-221ENST00000614198 LIAT1Q6ZQX7 453 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 WDR86Q86TI4 376 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 OR1L6Q8NGR2 347 aa8.37□□□□□ -1.07
GGA3-221ENST00000614198 IGSF23A1L1A6 192 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 SERPINE3A8MV23 424 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 NXPH2O95156 264 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 IFNA5P01569 189 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 IGKV3-15P01624 115 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 PRB1P04280 392 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 CD55P08174 381 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 HOXC12P31275 282 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 DYNLT3P51808 116 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 PPP1CBP62140 327 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 DAZAP2Q15038 168 aaPredicted RBP8.36□□□□□ -1.07
GGA3-221ENST00000614198 TBC1D28Q2M2D7 210 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 OR4D5Q8NGN0 318 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 TMEM171Q8WVE6 324 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 BORCS8Q96FH0 119 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 ZNF442Q9H7R0 627 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 DUSP13Q9UII6 198 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 GZMHP20718 246 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 TIMP3P35625 211 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 CDKN1BP46527 198 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 ZNF154Q13106 437 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 TMEM241Q24JQ0 296 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 COL5A1-AS1Q5SY13 56 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 ZNF826PQ6ZT77 177 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 ZNF611Q8N823 705 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 OR51G1Q8NGK1 321 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 SCGB1C1Q8TD33 95 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 KLF14Q8TD94 323 aaPredicted RBP8.36□□□□□ -1.07
GGA3-221ENST00000614198 SPSB4Q96A44 273 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 ZNF665Q9H7R5 613 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 PLEKHF2Q9H8W4 249 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 SLC2A9Q9NRM0 540 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 SLC25A15Q9Y619 301 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 A0A0U1RQK1 487 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 FAM90A27PA6NNH2 459 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 BCL2P10415 239 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 BCL3P20749 454 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 CENPVQ7Z7K6 275 aaPredicted RBP8.36□□□□□ -1.07
GGA3-221ENST00000614198 ANXA10Q9UJ72 324 aa8.36□□□□□ -1.07
GGA3-221ENST00000614198 IGHV2OR16-5A0A0B4J2B6 119 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 ZNF816-ZNF321PA0A0X1KG74 233 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 C20orf202A1L168 122 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 GNB2P62879 340 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 MALLQ13021 153 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 CXorf66Q5JRM2 361 aaPredicted RBP8.35□□□□□ -1.07
GGA3-221ENST00000614198 TMEM42Q69YG0 159 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 C16orf82Q7Z2V1 217 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 H1FOOQ8IZA3 346 aaPredicted RBP8.35□□□□□ -1.07
GGA3-221ENST00000614198 PP6455Q8WZ26 134 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 TBX15Q96SF7 602 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 P2RX4Q99571 388 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 PRORYQ9H606 182 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 NECAP2Q9NVZ3 263 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 GRPP07492 148 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 UCNP55089 124 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 Q6ZVH6 145 aa8.35□□□□□ -1.07
GGA3-221ENST00000614198 NANOS1Q8WY41 292 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms