RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 C1orf174Q8IYL3 243 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 PACRGLQ8N7B6 248 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 OR10P1Q8NGE3 313 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 HAVCR2Q8TDQ0 301 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 Q8WTZ3 238 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 CMTM5Q96DZ9 223 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 OR7D2Q96RA2 312 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 DHRS9Q9BPW9 319 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 PARD6GQ9BYG4 376 aaPredicted RBP1.3□□□□□ -2.2
TARDBP-214ENST00000613177 UBAP1Q9NZ09 502 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 MINOS1-NBL1R4GNA1 71 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 HSPE1-MOB4S4R3N1 261 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 CHD2O14647 1828 aaKnown RBP1.3□□□□□ -2.2
TARDBP-214ENST00000613177 KIF1BO60333 1816 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 PTPRJQ12913 1337 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 NUP155O75694 1391 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 ANKRD30AQ9BXX3 1397 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 SHANK2Q9UPX8 1470 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 EFCAB6Q5THR3 1501 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 LRRC7Q96NW7 1537 aa1.3□□□□□ -2.2
TARDBP-214ENST00000613177 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 IFT172Q9UG01 1749 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 NUP205Q92621 2012 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ZNF878C9JN71 531 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 G3V3Q6 166 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 M0R381 172 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 TP53I11O14683 189 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 DENRO43583 198 aaKnown RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ZNF73O43830 326 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 LY6HO94772 140 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 DEXIO95424 95 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 IGLV3-27P01718 113 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 HLA-DRAP01903 254 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 CPMP14384 443 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 RPS12P25398 132 aaKnown RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 CRYBB3P26998 211 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 OR10J1P30954 320 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 SERPINB10P48595 397 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 FGF12P61328 243 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 MED21Q13503 144 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 GNA13Q14344 377 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 JOSD1Q15040 202 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ACSBG2Q5FVE4 666 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 SMARCD3Q6STE5 483 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 TMPPEQ6ZT21 453 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 BAP18Q8IXM2 172 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 DNAAF3Q8N9W5 541 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 OR51H1Q8NH63 302 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 OR10A6Q8NH74 314 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 RNASE6Q93091 150 aaKnown RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 TMBIM1Q969X1 311 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 TBX5Q99593 518 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 MAP1LC3AQ9H492 121 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 UBQLN4Q9NRR5 601 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 SNX12Q9UMY4 172 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 FIS1Q9Y3D6 152 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 PCYT1BQ9Y5K3 369 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ALG5Q9Y673 324 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ZFYVE9O95405 1425 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ERBINQ96RT1 1412 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 CNTLNQ9NXG0 1405 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 SCAF11Q99590 1463 aaKnown RBP1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ADGRB3O60242 1522 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 SLIT1O75093 1534 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 NEXMIFQ5QGS0 1516 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ASXL1Q8IXJ9 1541 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 THSD7AQ9UPZ6 1657 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ROBO1Q9Y6N7 1651 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 PHLPP1O60346 1717 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 ATAD5Q96QE3 1844 aa1.29□□□□□ -2.2
TARDBP-214ENST00000613177 TMED7-TICAM2A0A0A6YYA0 188 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 MDFIC2A0A1B0GVS7 189 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 C21orf140B9A014 251 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 CXCR6O00574 342 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 PFDN6O15212 129 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 NIPSNAP2O75323 286 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 ZNF189O75820 626 aaPredicted RBP1.28□□□□□ -2.2
TARDBP-214ENST00000613177 OCM2P0CE71 109 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 SLC25A16P16260 332 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 OPRM1P35372 400 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 REG1BP48304 166 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 CTBP2P56545 445 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 TSPEAR-AS2P59090 65 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 HLA-DRB3P79483 266 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 SLC36A2Q495M3 483 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 COQ5Q5HYK3 327 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 RASL11AQ6T310 242 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 COMMD7Q86VX2 200 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 TMEM161BQ8NDZ6 487 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 OR4K13Q8NH42 304 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.28□□□□□ -2.2
TARDBP-214ENST00000613177 ARL5BQ96KC2 179 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 C20orf166-AS1Q96NR2 134 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 MGLLQ99685 303 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 TMEM109Q9BVC6 243 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 C1QTNF6Q9BXI9 259 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 EIF5A2Q9GZV4 153 aaKnown RBP1.28□□□□□ -2.2
TARDBP-214ENST00000613177 OR51B6Q9H340 312 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 C11orf1Q9H5F2 150 aa1.28□□□□□ -2.2
TARDBP-214ENST00000613177 POLR3HQ9Y535 204 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms