RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 A0A1W2PPB8 328 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 A0A1W2PRS3 328 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 KIR3DP1A8MWS1 328 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 TSPOP30536 169 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 YAE1D1Q9NRH1 226 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 FAM90A26D6RGX4 464 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
CTDP1-208ENST00000613122 TPRP12270 2363 aaKnown RBP17.22■□□□□ 0.35
CTDP1-208ENST00000613122 CRYBA2P53672 197 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 A8MWL6 223 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 MRPL14Q6P1L8 145 aaKnown RBP17.22■□□□□ 0.35
CTDP1-208ENST00000613122 IMMP1LQ96LU5 166 aa17.22■□□□□ 0.35
CTDP1-208ENST00000613122 RAB9AP51151 201 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 WDFY1Q8IWB7 410 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 C9orf62Q8N4C0 152 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 RSG1Q9BU20 258 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 VSIG10L2P0DP72 767 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 SNRPD3P62318 126 aaKnown RBP17.21■□□□□ 0.35
CTDP1-208ENST00000613122 RNASE6Q93091 150 aaKnown RBP17.21■□□□□ 0.35
CTDP1-208ENST00000613122 C5orf52A6NGY3 159 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 MIC13Q5XKP0 118 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 KCNAB3O43448 404 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 ZIC3O60481 467 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 RAMP1O60894 148 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 KBTBD11O94819 623 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 SRSF9Q13242 221 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTDP1-208ENST00000613122 FAM53AQ6NSI3 398 aaPredicted RBP17.21■□□□□ 0.35
CTDP1-208ENST00000613122 FUT9Q9Y231 359 aa17.21■□□□□ 0.35
CTDP1-208ENST00000613122 IGHV2OR16-5A0A0B4J2B6 119 aa17.21■□□□□ 0.34
CTDP1-208ENST00000613122 MEOX2P50222 304 aa17.21■□□□□ 0.34
CTDP1-208ENST00000613122 SIAH2O43255 324 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 TRGV3P03979 118 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 BCL2P10415 239 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 LOC389332A0A1B0GUA5 103 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 UMODP07911 640 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 ACP7Q6ZNF0 438 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 ELOVL1Q9BW60 279 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 ZXDCQ2QGD7 858 aaPredicted RBP17.2■□□□□ 0.34
CTDP1-208ENST00000613122 UNQ9370/PRO34162Q6UXP9 181 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 DNAJC4Q9NNZ3 241 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 RPL29P47914 159 aaKnown RBP17.2■□□□□ 0.34
CTDP1-208ENST00000613122 SLC16A13Q7RTY0 426 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 ISOC2Q96AB3 205 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 MIEN1Q9BRT3 115 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 OR5AC2Q9NZP5 309 aa17.2■□□□□ 0.34
CTDP1-208ENST00000613122 TGFAP01135 160 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 PQLC2Q6ZP29 291 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 RGP1Q92546 391 aaPredicted RBP17.19■□□□□ 0.34
CTDP1-208ENST00000613122 WDYHV1Q96HA8 205 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 RTN4RQ9BZR6 473 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
CTDP1-208ENST00000613122 ACAA1P09110 424 aaPredicted RBP17.19■□□□□ 0.34
CTDP1-208ENST00000613122 TNFRSF9Q07011 255 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 STPG2Q8N412 459 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 ANGPTL6Q8NI99 470 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 TUBD1Q9UJT1 453 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 LINC01590Q5TEZ4 76 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 TUBA4BQ9H853 241 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 DPM3Q9P2X0 92 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 TDRD6O60522 2096 aaKnown RBP17.19■□□□□ 0.34
CTDP1-208ENST00000613122 PLAURQ03405 335 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 C11orf91Q3C1V1 193 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 C7orf69Q9H7B7 122 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 TCF19Q9Y242 345 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 PHLDA3Q9Y5J5 127 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 C7orf77A4D0Y5 90 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 KLF4O43474 513 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 ZNF146Q15072 292 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 C1QTNF12Q5T7M4 302 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 OR4C5Q8NGB2 326 aa17.19■□□□□ 0.34
CTDP1-208ENST00000613122 ZNF418Q8TF45 676 aaPredicted RBP17.19■□□□□ 0.34
CTDP1-208ENST00000613122 IGHV1-2P23083 117 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 SPACA3Q8IXA5 215 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 VKORC1L1Q8N0U8 176 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 C9orf106Q8NAJ2 232 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 MRPS18CQ9Y3D5 142 aaKnown RBP17.18■□□□□ 0.34
CTDP1-208ENST00000613122 NINQ8N4C6 2090 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 M0R3E3 92 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 ZG16O60844 167 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 GPX1P07203 203 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 P2RY4P51582 365 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 GPHA2Q96T91 129 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 PPP1R3EQ9H7J1 279 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 MFAP2P55001 183 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 CX3CL1P78423 397 aa17.18■□□□□ 0.34
CTDP1-208ENST00000613122 TAF15Q92804 592 aaKnown RBP eCLIP17.18■□□□□ 0.34
CTDP1-208ENST00000613122 NRN1LQ496H8 165 aa17.17■□□□□ 0.34
CTDP1-208ENST00000613122 TXNDC17Q9BRA2 123 aa17.17■□□□□ 0.34
CTDP1-208ENST00000613122 TM4SF5O14894 197 aa17.17■□□□□ 0.34
CTDP1-208ENST00000613122 RTN4RL2Q86UN3 420 aa17.17■□□□□ 0.34
CTDP1-208ENST00000613122 OR4X2Q8NGF9 303 aa17.17■□□□□ 0.34
CTDP1-208ENST00000613122 PLXNA1Q9UIW2 1896 aa17.17■□□□□ 0.34
CTDP1-208ENST00000613122 NDUFB4O95168 129 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 ZNF818PQ6ZRF7 136 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 OR1N2Q8NGR9 330 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 NRIP2Q9BQI9 281 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.16■□□□□ 0.34
CTDP1-208ENST00000613122 M0R143 59 aa17.16■□□□□ 0.34
CTDP1-208ENST00000613122 CDKN1AP38936 164 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms