RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZNF600Q6ZNG1 722 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
COL6A1-207ENST00000612273 PINX1Q96BK5 328 aaKnown RBP11.77□□□□□ -0.53
COL6A1-207ENST00000612273 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
COL6A1-207ENST00000612273 PKIBQ9C010 78 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 SPTA1P02549 2419 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 TMEM30CPA0ZSE6 113 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 AMBPP02760 352 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 CCL11P51671 97 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 DPPA3Q6W0C5 159 aa11.77□□□□□ -0.53
COL6A1-207ENST00000612273 PSMG3Q9BT73 122 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-207ENST00000612273 MLNRO43193 412 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 SRSF7Q16629 238 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL6A1-207ENST00000612273 ABHD12Q8N2K0 398 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 COQ2Q96H96 371 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 HEYLQ9NQ87 328 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-207ENST00000612273 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-207ENST00000612273 TSTD3H0UI37 97 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-207ENST00000612273 KBTBD11O94819 623 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 C1QTNF9P0C862 333 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 COX5AP20674 150 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 NPPCP23582 126 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 DDTP30046 118 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
COL6A1-207ENST00000612273 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
COL6A1-207ENST00000612273 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-207ENST00000612273 A0A1W2PPV4 95 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 ZNF320A2RRD8 509 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 SPINK4O60575 86 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 CD46P15529 392 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 CATR1Q13166 79 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 RPL39P5Q59GN2 51 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 UTF1Q5T230 341 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 TMEM14EPQ6UXP3 125 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 TMEM147Q9BVK8 224 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 MRPS18CQ9Y3D5 142 aaKnown RBP11.75□□□□□ -0.53
COL6A1-207ENST00000612273 MARCH11A6NNE9 402 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 SOX8P57073 446 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 VWA1Q6PCB0 445 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 CYP2G1PQ6ZSU1 146 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 UBALD2Q8IYN6 164 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 ZNF114Q8NC26 417 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 PITPNC1Q9UKF7 332 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 KLF13Q9Y2Y9 288 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-207ENST00000612273 ACACAQ13085 2346 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 TRAV3A0A0B4J244 114 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 CTXND1A0A1B0GTU2 59 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 PFN1P07737 140 aaKnown RBP11.75□□□□□ -0.53
COL6A1-207ENST00000612273 HOXC12P31275 282 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 CDC34P49427 236 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-207ENST00000612273 ZNF766Q5HY98 468 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 LINC00596Q86U02 117 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
COL6A1-207ENST00000612273 M0R1X1 148 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 OR9G9P0C7N8 305 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 ACP1P24666 158 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 RND2P52198 227 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 SELLP14151 372 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 MYOD1P15172 320 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 ERVK11-1P61568 191 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 MOB1BQ7L9L4 216 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 ZNRF1Q8ND25 227 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 OR2Z1Q8NG97 314 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 OR2T10Q8NGZ9 312 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 GP6Q9HCN6 339 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 HSPB7Q9UBY9 170 aa11.74□□□□□ -0.53
COL6A1-207ENST00000612273 TRBV24-1A0A075B6N3 115 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 ELOA3CA0A087WX78 387 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-207ENST00000612273 TRBV6-6A0A0A6YYG2 114 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 ACTL6BO94805 426 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 NDUFB7P17568 137 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 LURAP1LQ8IV03 231 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 DMRTC2Q8IXT2 367 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-207ENST00000612273 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 FAM122AQ96E09 287 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
COL6A1-207ENST00000612273 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-207ENST00000612273 RRHO14718 337 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 GZMBP10144 247 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 NEIL1Q96FI4 390 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-207ENST00000612273 ZNF318Q5VUA4 2279 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 AQP7O14520 342 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 SCGB1D1O95968 90 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 ZNF146Q15072 292 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 ASPHD1Q5U4P2 390 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 LRRC29Q8WV35 223 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 P2RX4Q99571 388 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 SRD5A3Q9H8P0 318 aa11.73□□□□□ -0.53
COL6A1-207ENST00000612273 TDGF1P13385 188 aa11.72□□□□□ -0.53
COL6A1-207ENST00000612273 GPR12P47775 334 aa11.72□□□□□ -0.53
COL6A1-207ENST00000612273 FOXF2Q12947 444 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms