RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 ADTRPQ96IZ2 230 aa9.65□□□□□ -0.86
CLK4-215ENST00000611733 SEC22CQ9BRL7 303 aa9.65□□□□□ -0.86
CLK4-215ENST00000611733 WASHC3Q9Y3C0 194 aa9.65□□□□□ -0.86
CLK4-215ENST00000611733 INMT-MINDY4F8WBC2 141 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 OR4E1P0C645 316 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 RPA2P15927 270 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 BRS3P32247 399 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 LPAR6P43657 344 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 DYNLT3P51808 116 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 SRSF2Q01130 221 aaKnown RBP9.64□□□□□ -0.87
CLK4-215ENST00000611733 OXA1LQ15070 435 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 TMEM128Q5BJH2 165 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 CCDC71LQ8N9Z2 235 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 LHFPL5Q8TAF8 219 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 MARVELD1Q9BSK0 173 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 S1PR2O95136 353 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 VAMP1P23763 118 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 MC5RP33032 325 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 CATR1Q13166 79 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 EBI3Q14213 229 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 SGPP2Q8IWX5 399 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 CASTOR1Q8WTX7 329 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 PRELID3BQ9Y3B1 194 aa9.64□□□□□ -0.87
CLK4-215ENST00000611733 A0A0B4J293 547 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 C9orf170A2RU37 121 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 A6NDX4 124 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 MOSP00540 346 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 APOA2P02652 100 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 FAM157CP0CG43 387 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 S100GP29377 79 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 MECP2P51608 486 aaKnown RBP9.63□□□□□ -0.87
CLK4-215ENST00000611733 UBE2MP61081 183 aaKnown RBP9.63□□□□□ -0.87
CLK4-215ENST00000611733 RPS16P62249 146 aaKnown RBP9.63□□□□□ -0.87
CLK4-215ENST00000611733 DHRS2Q13268 280 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 TMEM187Q14656 261 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 ANKRD55Q3KP44 614 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 C4orf46Q504U0 113 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 LIN54Q6MZP7 749 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 THNSL2Q86YJ6 484 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 Q8N6K4 173 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 TAF15Q92804 592 aaKnown RBP eCLIP9.63□□□□□ -0.87
CLK4-215ENST00000611733 FLYWCH2Q96CP2 140 aaKnown RBP9.63□□□□□ -0.87
CLK4-215ENST00000611733 PLSCR3Q9NRY6 295 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 RNF212BA8MTL3 300 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 H0Y980 276 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 CHST1O43916 411 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 SFT2D2O95562 160 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 IGLV2-23P01705 113 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 FAM106CPP0CH98 169 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 TMEM11P17152 192 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 RTL8BQ17RB0 113 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 PDPNQ86YL7 162 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 OR2T10Q8NGZ9 312 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 CHIAQ9BZP6 476 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 TMEM222Q9H0R3 208 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 ALX4Q9H161 411 aaPredicted RBP9.63□□□□□ -0.87
CLK4-215ENST00000611733 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
CLK4-215ENST00000611733 TCF19Q9Y242 345 aa9.63□□□□□ -0.87
CLK4-215ENST00000611733 SH2D7A6NKC9 451 aaPredicted RBP9.62□□□□□ -0.87
CLK4-215ENST00000611733 HLA-AP01891 365 aaKnown RBP9.62□□□□□ -0.87
CLK4-215ENST00000611733 UCP1P25874 307 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 ARHGDIBP52566 201 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 AANATQ16613 207 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 TRIM16LQ309B1 348 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 TMEM177Q53S58 311 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 SSX9Q7RTT3 188 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 CHPT1Q8WUD6 406 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 KCNIP3Q9Y2W7 256 aa9.62□□□□□ -0.87
CLK4-215ENST00000611733 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 SHOXO15266 292 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 KRASP01116 189 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 IFNA2P01563 188 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 G6PCP35575 357 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 TAS2R31P59538 309 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 TAGLNQ01995 201 aaKnown RBP9.61□□□□□ -0.87
CLK4-215ENST00000611733 IZUMO4Q1ZYL8 232 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 RBMS3Q6XE24 437 aaKnown RBP9.61□□□□□ -0.87
CLK4-215ENST00000611733 LYG2Q86SG7 212 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
CLK4-215ENST00000611733 OR4C13Q8NGP0 309 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 OR4S2Q8NH73 311 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 SSMEM1Q8WWF3 244 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 HARBI1Q96MB7 349 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLK4-215ENST00000611733 CDS2O95674 445 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 HPRT1P00492 218 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 SERPINE2P07093 398 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 RRASP10301 218 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 PSG5Q15238 335 aa9.61□□□□□ -0.87
CLK4-215ENST00000611733 TRAV3A0A0B4J244 114 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
CLK4-215ENST00000611733 FCN1O00602 326 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 SLC25A17O43808 307 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 AMY1AP04745 511 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 KIR2DS2P43631 304 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 MMDQ15546 238 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms