RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 ST8SIA5O15466 376 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 CCNKO75909 580 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 ANXA3P12429 323 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 S100GP29377 79 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 MSMO1Q15800 293 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 LY6G6FQ5SQ64 297 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 HEPN1Q6WQI6 88 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 TMEM219Q86XT9 240 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 ZNF645Q8N7E2 425 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 OR2AK2Q8NG84 335 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 OR11H7Q8NGC8 314 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 GALNT14Q96FL9 552 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 AKR1E2Q96JD6 320 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 CLEC7AQ9BXN2 247 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 OR2D2Q9H210 308 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 ZNF702PQ9H963 129 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 MGAT4CQ9UBM8 478 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 HILPDAQ9Y5L2 63 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 VWFP04275 2813 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 PLXNB1O43157 2135 aa9.25□□□□□ -0.93
LINC00539-204ENST00000608957 A0A0B4J2A0 478 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 MPPED1O15442 326 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 WIPF1O43516 503 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 SLC22A5O76082 557 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 TSPAN15O95858 294 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 IGLV1-47P01700 117 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 IGLV2-14P01704 120 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 OR5AC1P0C628 307 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 NFYBP25208 207 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 RAB7AP51149 207 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 CD83Q01151 205 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 HABP2Q14520 560 aaPredicted RBP9.24□□□□□ -0.93
LINC00539-204ENST00000608957 Q3ZCU0 254 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 MINOS1Q5TGZ0 78 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 Q6ZS46 218 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 TBC1D26Q86UD7 250 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 DRAM1Q8N682 238 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 UXS1Q8NBZ7 420 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 ZBTB34Q8NCN2 500 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 PPP1R14BQ96C90 147 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 ST6GAL2Q96JF0 529 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 ABHD14AQ9BUJ0 271 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 SHPKQ9UHJ6 478 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 PSG11Q9UQ72 335 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 MINOS1-NBL1R4GNA1 71 aa9.24□□□□□ -0.93
LINC00539-204ENST00000608957 GOSR2O14653 212 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 SLC31A2O15432 143 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 KCNAB3O43448 404 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 TNFSF12O43508 249 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 CXCL3P19876 107 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 GNG10P50151 68 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 DYNLT3P51808 116 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 CD300CQ08708 224 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 LIN54Q6MZP7 749 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 KCTD9Q7L273 389 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 ABHD12Q8N2K0 398 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 ZNF439Q8NDP4 499 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 AGMATQ9BSE5 352 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 IFI27L2Q9H2X8 130 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 RANBP3Q9H6Z4 567 aaPredicted RBP9.23□□□□□ -0.93
LINC00539-204ENST00000608957 RNF150Q9ULK6 438 aa9.23□□□□□ -0.93
LINC00539-204ENST00000608957 A0A087X0M5 115 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 C3orf85A0A1B0GTC6 90 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 A0A1B0GX30 115 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 DBX1A6NMT0 343 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 H0Y980 276 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 LY6LH3BQJ8 138 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 PGLYRP1O75594 196 aaPredicted RBP9.22□□□□□ -0.93
LINC00539-204ENST00000608957 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 IGHV3-7P01780 117 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 CD24P25063 80 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 GPR12P47775 334 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 TMEM187Q14656 261 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 HLA-DRB5Q30154 266 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 Q8N2B8 174 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 KLHDC1Q8N7A1 406 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 OR4C13Q8NGP0 309 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 OR5M8Q8NGP6 311 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 LEAP2Q969E1 77 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 C5orf30Q96GV9 206 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 ABHD14BQ96IU4 210 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 TP53RKQ96S44 253 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 GPHA2Q96T91 129 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 RANGRFQ9HD47 186 aaPredicted RBP9.22□□□□□ -0.93
LINC00539-204ENST00000608957 SERTAD4Q9NUC0 356 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 LIN7CQ9NUP9 197 aaKnown RBP9.22□□□□□ -0.93
LINC00539-204ENST00000608957 SDHAF2Q9NX18 166 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
LINC00539-204ENST00000608957 A0A1W2PPE3 182 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 TIMM23O14925 209 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 GIPP09681 153 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-204ENST00000608957 F2RP25116 425 aa9.21□□□□□ -0.94
LINC00539-204ENST00000608957 HTR1DP28221 377 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms