RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 UBE2NP61088 152 aaKnown RBP12.29□□□□□ -0.44
CTCFL-219ENST00000608720 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
CTCFL-219ENST00000608720 COTL1Q14019 142 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 FFAR4Q5NUL3 377 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 VASH2Q86V25 355 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 SLC25A40Q8TBP6 338 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 NINJ1Q92982 152 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 RPUSD4Q96CM3 377 aaKnown RBP12.29□□□□□ -0.44
CTCFL-219ENST00000608720 MIEN1Q9BRT3 115 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 DEFB127Q9H1M4 99 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 SLC25A22Q9H936 323 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 LPAR2Q9HBW0 351 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 OR6C3Q9NZP0 311 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 CLN8Q9UBY8 286 aa12.29□□□□□ -0.44
CTCFL-219ENST00000608720 DCHS1Q96JQ0 3298 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-219ENST00000608720 DOCK10Q96BY6 2186 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 H7BYZ3 331 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 PSPNO60542 156 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 S1PR2O95136 353 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 CLDN14O95500 239 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 CD46P15529 392 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 SRP14P37108 136 aaKnown RBP12.28□□□□□ -0.44
CTCFL-219ENST00000608720 IDH3GP51553 393 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-219ENST00000608720 TGFBR3Q03167 851 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 ALKBH6Q3KRA9 238 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-219ENST00000608720 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-219ENST00000608720 ZNF709Q8N972 641 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 OR52L2PQ8NGH6 319 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 C5orf30Q96GV9 206 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 ZNF407Q9C0G0 2248 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 GPR179Q6PRD1 2367 aa12.28□□□□□ -0.44
CTCFL-219ENST00000608720 TRGV5A0A0B4J1U4 118 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 TNFSF13O75888 250 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 SCGB1D1O95968 90 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 HPRT1P00492 218 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 HBZP02008 142 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.44
CTCFL-219ENST00000608720 GZMHP20718 246 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 RPL29P47914 159 aaKnown RBP12.27□□□□□ -0.44
CTCFL-219ENST00000608720 CNN1P51911 297 aaKnown RBP12.27□□□□□ -0.44
CTCFL-219ENST00000608720 ERVS71-1P61550 626 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 LCN2P80188 198 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 PSG7Q13046 419 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 LPAL2Q16609 132 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 VWC2Q2TAL6 325 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 OR4F5Q8NH21 305 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 OR4F4Q96R69 305 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 PARLQ9H300 379 aa12.27□□□□□ -0.44
CTCFL-219ENST00000608720 IGHV3-64DA0A0J9YX35 117 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 C1QTNF9BB2RNN3 333 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 HMGB3O15347 200 aaKnown RBP12.27□□□□□ -0.45
CTCFL-219ENST00000608720 CEBPDP49716 269 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-219ENST00000608720 H2BFWTQ7Z2G1 175 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 GMPPAQ96IJ6 420 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-219ENST00000608720 FER1L6-AS2Q96M78 137 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 TAAR6Q96RI8 345 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 ASPMQ8IZT6 3477 aa12.27□□□□□ -0.45
CTCFL-219ENST00000608720 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-219ENST00000608720 A0A1W2PNU3 283 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-219ENST00000608720 C17orf98A8MV24 154 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 ZG16O60844 167 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 MPLP40238 635 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 GNB2P62879 340 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 NPCDR1Q9BY65 106 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 OBP2BQ9NPH6 170 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 SPRR3Q9UBC9 169 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 COL27A1Q8IZC6 1860 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-219ENST00000608720 ZNF891A8MT65 544 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-219ENST00000608720 IRF2P14316 349 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 BRWD1-AS2P59051 145 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 AESQ08117 197 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-219ENST00000608720 NECAP1Q8NC96 275 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
CTCFL-219ENST00000608720 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
CTCFL-219ENST00000608720 VENTXO95231 258 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 IGHV1-2P23083 117 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 GNG10P50151 68 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 TFF3Q07654 80 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 DMRTA1Q5VZB9 504 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 INO80CQ6PI98 192 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-219ENST00000608720 TEX43Q6ZNM6 134 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 OR2T10Q8NGZ9 312 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 ZCCHC14Q8WYQ9 949 aaKnown RBP12.25□□□□□ -0.45
CTCFL-219ENST00000608720 FUT9Q9Y231 359 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 EP300Q09472 2414 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-219ENST00000608720 ITGB1BP1O14713 200 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
CTCFL-219ENST00000608720 GYPAP02724 150 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 TUBG1P23258 451 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 CD82P27701 267 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 WDR31Q8NA23 367 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 KLF14Q8TD94 323 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-219ENST00000608720 GATAD1Q8WUU5 269 aa12.25□□□□□ -0.45
CTCFL-219ENST00000608720 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms