RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 GTF3C1Q12789 2109 aa3.41□□□□□ -1.86
HMGB1P50-201ENST00000605814 PPIAL4EA0A075B759 164 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRGV10A0A0A0MS01 117 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRBV6-6A0A0A6YYG2 114 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PPIAL4CA0A0B4J2A2 164 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 LOC101059948A0A1B0GTJ6 334 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 MDFIC2A0A1B0GVS7 189 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1W2PNV4 684 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 C2orf70A6NJV1 201 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR11H12B2RN74 326 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PPIAL4DF5H284 164 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 M0R1X1 148 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 FCN1O00602 326 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 SH2D1BO14796 132 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 SIVA1O15304 175 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ADAM20O43506 726 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 SYNGR2O43760 224 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 SSSCA1O60232 199 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 RHBDL1O75783 438 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 GOSR1O95249 250 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 MPZL1O95297 269 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 MT-CO2P00403 227 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1D-33P01593 117 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-33P01594 117 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 HLA-DQA1P01909 254 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR5AL1P0C617 328 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 SP9P0CG40 484 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PPIAL4FP0DN26 164 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 EGR2P11161 476 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 GP1BBP13224 206 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 AREGP15514 252 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGLL1P15814 213 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 COX5AP20674 150 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 CCNOP22674 350 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 AMTP48728 403 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PPOXP50336 477 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 GPM6AP51674 278 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 HERV-K104P61576 105 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 GNB1P62873 340 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 MRPS34P82930 218 aaKnown RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF90Q03938 601 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ARL16Q0P5N6 197 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 HLA-BQ31612 363 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 CD300EQ496F6 205 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 DEFB134Q4QY38 66 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PHLDA2Q53GA4 152 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF324BQ6AW86 544 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 WDR74Q6RFH5 385 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 DGAT2L6Q6ZPD8 337 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM136Q6ZRR5 245 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM57BQ71RH2 274 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 H1FNTQ75WM6 255 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 C6orf201Q7Z4U5 140 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 CPEB2Q7Z5Q1 589 aaKnown RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 TBC1D26Q86UD7 250 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 HAPLN4Q86UW8 402 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 UEVLDQ8IX04 471 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 UBALD2Q8IYN6 164 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF439Q8NDP4 499 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR11H1Q8NG94 326 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR8B12Q8NGG6 310 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR1B1Q8NGR6 318 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR11H2Q8NH07 326 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR4F5Q8NH21 305 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR51E1Q8TCB6 317 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 C18orf32Q8TCD1 76 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 TSKUQ8WUA8 353 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 C11orf52Q96A22 123 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ELSPBP1Q96BH3 223 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR6C1Q96RD1 312 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 NRTNQ99748 197 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 KLHDC3Q9BQ90 382 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 RBM24Q9BX46 236 aaKnown RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ULBP2Q9BZM5 246 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 MBNL1Q9NR56 388 aaKnown RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 OSTCQ9NRP0 149 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PNO1Q9NRX1 252 aaKnown RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 CENPMQ9NSP4 180 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 PSENENQ9NZ42 101 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 NXT1Q9UKK6 140 aaKnown RBP3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC17A4Q9Y2C5 497 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 ARHGAP21Q5T5U3 1957 aa3.4□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMED7-TICAM2A0A0A6YYA0 188 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRAV8-6A0A0B4J262 113 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 EDDM13A0A1B0GTR0 161 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1B0GUS0 222 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 SERTM2A0A1B0GWG4 89 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 GRIFINA4D1Z8 144 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PMS2P5A8MQ11 134 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 ALG1L2C9J202 215 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 C11orf94C9JXX5 98 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 H0YGG7 62 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PAGE4O60829 102 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PDCD6O75340 191 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 MPDU1O75352 247 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PGLYRP1O75594 196 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 DHRS3O75911 302 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2J3O76001 311 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 UTS2O95399 124 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms