RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PRDX4Q13162 271 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 ATXN7L3Q14CW9 347 aaPredicted RBP4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 TSPO2Q5TGU0 170 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 LCN15Q6UWW0 184 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 STAC2Q6ZMT1 411 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 LCNL1Q6ZST4 164 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 OR10D3Q8NH80 312 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 SP7Q8TDD2 431 aaPredicted RBP4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 WDR13Q9H1Z4 485 aa4.83□□□□□ -1.64
COL4A3BP-207ENST00000604926 A0A1W2PNR3 127 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 M0R1X1 148 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 GPX1P07203 203 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 YPEL3P61236 119 aaPredicted RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 DPPA3Q6W0C5 159 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZNF730Q6ZMV8 503 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 CMC1Q7Z7K0 106 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 VKORC1L1Q8N0U8 176 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PDCD1LG2Q9BQ51 273 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SOSTQ9BQB4 213 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 C5orf66Q9H5L9 145 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 POLR2AP24928 1970 aaKnown RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 MYO10Q9HD67 2058 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 RER1O15258 196 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SCTP09683 121 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 RPL11P62913 178 aaKnown RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 KLRD1Q13241 179 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SLC25A35Q3KQZ1 300 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PRR30Q53SZ7 412 aaPredicted RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZNF880Q6PDB4 577 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PIANPQ8IYJ0 282 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PRR22Q8IZ63 422 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PGBD5Q8N414 524 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 C9orf85Q96MD7 179 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZIC5Q96T25 663 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 GFI1Q99684 422 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 MCHR1Q99705 422 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PARP11Q9NR21 331 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 FZR1Q9UM11 496 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 POLR1DQ9Y2S0 133 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 H3BTX0 84 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PPP1R11O60927 126 aaPredicted RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 C1RP00736 705 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SRD5A1P18405 259 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 KLK2P20151 261 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 GPX3P22352 226 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 HOXD3P31249 432 aaPredicted RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 RPS4XP62701 263 aaKnown RBP4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 LYRM7Q5U5X0 104 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 C11orf87Q6NUJ2 197 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SPSB3Q6PJ21 355 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SHISA6Q6ZSJ9 500 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 AMIGO3Q86WK7 504 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 OR4F17Q8NGA8 305 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 CT55Q8WUE5 264 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 OR4F4Q96R69 305 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 KIR2DL4Q99706 377 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 SPANXCQ9NY87 97 aa4.82□□□□□ -1.64
COL4A3BP-207ENST00000604926 PDE4DIPQ5VU43 2346 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 TTC3P53804 2025 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 PDCD11Q14690 1871 aaKnown RBP4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 TRAV18A0A075B6X5 111 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 CXorf49A8MYA2 514 aaPredicted RBP4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 NGFP01138 241 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 FCGR3AP08637 254 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 CTSEP14091 401 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 HERVK_113P63121 156 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 KLF5Q13887 457 aaPredicted RBP4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 SPANXN3Q5MJ09 141 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 LCN12Q6JVE5 192 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 GDPGP1Q6ZNW5 385 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 C1QL2Q7Z5L3 287 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 COX18Q8N8Q8 333 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 OR51E1Q8TCB6 317 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 DEPPQ9NTK1 212 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 SCN10AQ9Y5Y9 1956 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 UMAD1C9J7I0 102 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 OVOL3O00110 214 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 GNGT2O14610 69 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 P01737 135 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 FSTP19883 344 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 KIR2DS2P43631 304 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 EEF1DP3Q658K8 133 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 HMGN2P46Q86SG4 172 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 C1orf174Q8IYL3 243 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 ARPC1AQ92747 370 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 PRSS22Q9GZN4 317 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 SAP30LQ9HAJ7 183 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 NRN1Q9NPD7 142 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 RBM22Q9NW64 420 aaKnown RBP eCLIP4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 MDFICQ9P1T7 246 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 WASHC3Q9Y3C0 194 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 IER3IP1Q9Y5U9 82 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 ANK1P16157 1881 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 A0A087WWC5 75 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZNF860A6NHJ4 632 aa4.81□□□□□ -1.64
COL4A3BP-207ENST00000604926 NME4O00746 187 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms