RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 CSAG2Q9Y5P2 127 aa4.18□□□□□ -1.74
SPTBN1-206ENST00000602898 MYLKQ15746 1914 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 CCDC88CQ9P219 2028 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 TRBV4-1A0A0J9YWV2 114 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF503-AS2A6NEH8 195 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR51F1A6NGY5 319 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR4C45A6NMZ5 311 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 K7EQS6 105 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 KIR2DS3K7RE56 304 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 CCL22O00626 93 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 CD5LO43866 347 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 HLA-DQA2P01906 255 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 SFTPDP35247 375 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 THBS3P49746 956 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 HMGA2P52926 109 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 FOXG1P55316 489 aaPredicted RBP4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 HILS1P60008 231 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 INSL4Q14641 139 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 KIR2DS3Q14952 304 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 FKBP1CQ5VVH2 108 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A48Q6ZT89 311 aaKnown RBP4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 Q6ZWC4 215 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF429Q86V71 674 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 IQCF1Q8N6M8 205 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR5A1Q8NGJ0 315 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR10G4Q8NGN3 311 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A40Q8TBP6 338 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 FRG2BQ96QU4 278 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR51I2Q9H344 312 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 IDI2-AS1Q9NZ38 188 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 NINQ8N4C6 2090 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ATG2BQ96BY7 2078 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 SIP14410 1827 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 TRAV1-2A0A0B4J238 106 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM236DA0A1B0GTK5 79 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 MYADML2A6NDP7 307 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF850A8MQ14 1090 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 DEGS1O15121 323 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 HCRTO43612 131 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 JTBO76095 146 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 CGAP01215 116 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 HSPB1P04792 205 aaKnown RBP4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM236CP0DP71 79 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 TNFRSF1BP20333 461 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 NTSP30990 170 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 S100A3P33764 101 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 TSFMP43897 325 aaKnown RBP4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 PPICP45877 212 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 RPS14P62263 151 aaKnown RBP4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 HLA-DRB3P79483 266 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF92Q03936 586 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 CD164Q04900 197 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A35Q3KQZ1 300 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF260Q3ZCT1 412 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 DPPA3Q6W0C5 159 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ANKRD37Q7Z713 158 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 DEFB106AQ8N104 65 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR1L8Q8NGR8 309 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 OR13C6PQ8NH95 151 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC37A2Q8TED4 501 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 KLK6Q92876 244 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 IL22RA2Q969J5 263 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 STARD4Q96DR4 205 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 DOHHQ9BU89 302 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 BANF2Q9H503 90 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 NPVFQ9HCQ7 196 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 KLK11Q9UBX7 282 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 TP53TG1Q9Y2A0 90 aa4.17□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF106Q9H2Y7 1883 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 RALGAPA1Q6GYQ0 2036 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM90A26D6RGX4 464 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SRP19P09132 144 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 RPL7P18124 248 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 AQP1P29972 269 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 HRH1P35367 487 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 OR1D4P47884 311 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SSR4P51571 173 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SUMO2P61956 95 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SSBP1Q04837 148 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 PLP2Q04941 152 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 TAF10Q12962 218 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM27D1Q5T7N8 215 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 Q6ZSR6 202 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 CMTM4Q8IZR5 234 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 VKORC1L1Q8N0U8 176 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 UMODL1-AS1Q8N2C9 162 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF615Q8N8J6 731 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 OR4C16Q8NGL9 310 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 CMTM2Q8TAZ6 248 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SYNPRQ8TBG9 265 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 BTF3L4Q96K17 158 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 OXGR1Q96P68 337 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 LRRC61Q9BV99 259 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 TMEM59Q9BXS4 323 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 COA1Q9GZY4 146 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 ZDHHC11Q9H8X9 412 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 STARD5Q9NSY2 213 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms