RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SCGNO76038 276 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 RRASP10301 218 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 TPPP2P59282 170 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 RTL8BQ17RB0 113 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 ZNF429Q86V71 674 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 LGALS14Q8TCE9 139 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 ADTRPQ96IZ2 230 aa17.47■□□□□ 0.39
SSBP4-209ENST00000601357 RBM7Q9Y580 266 aaKnown RBP17.47■□□□□ 0.39
SSBP4-209ENST00000601357 LINC00473A8K010 186 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 H3BUA1 57 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 IGHV3-11P01762 117 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 CD40LGP29965 261 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 SDC2P34741 201 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 PITPNAQ00169 270 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 CBX3Q13185 183 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 NUDCD2Q8WVJ2 157 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 ST6GALNAC5Q9BVH7 336 aa17.46■□□□□ 0.39
SSBP4-209ENST00000601357 TMEM235A6NFC5 223 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 SHOXO15266 292 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 SSX5O60225 188 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 CNIH1O95406 144 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 BRI3O95415 125 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 TRGV3P03979 118 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 HSPB1P04792 205 aaKnown RBP17.45■□□□□ 0.38
SSBP4-209ENST00000601357 POC5Q8NA72 575 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 RNF167Q9H6Y7 350 aa17.45■□□□□ 0.38
SSBP4-209ENST00000601357 HLA-DQB1P01920 261 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 CTXN2P0C2S0 81 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 SCAND1P57086 179 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 ACSM6Q6P461 480 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 ZNF645Q8N7E2 425 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 TEX45Q8NA69 505 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 TMEM68Q96MH6 324 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 RHBDL2Q9NX52 303 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 OR2W1Q9Y3N9 320 aa17.44■□□□□ 0.38
SSBP4-209ENST00000601357 IGLV2-14P01704 120 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 CLEC2LP0C7M8 214 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 UBE2KP61086 200 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 MXD1Q05195 221 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 KCTD21Q4G0X4 260 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 CNIH2Q6PI25 160 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 OR5T1Q8NG75 326 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 OSR1Q8TAX0 266 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-209ENST00000601357 SLC25A38Q96DW6 304 aa17.43■□□□□ 0.38
SSBP4-209ENST00000601357 SAP30O75446 220 aa17.42■□□□□ 0.38
SSBP4-209ENST00000601357 CRYZL1O95825 349 aa17.42■□□□□ 0.38
SSBP4-209ENST00000601357 NHLRC4P0CG21 123 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-209ENST00000601357 NFYAP23511 347 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-209ENST00000601357 GNG2P59768 71 aa17.42■□□□□ 0.38
SSBP4-209ENST00000601357 ANXA10Q9UJ72 324 aa17.42■□□□□ 0.38
SSBP4-209ENST00000601357 ETV7Q9Y603 341 aa17.42■□□□□ 0.38
SSBP4-209ENST00000601357 KMT2CQ8NEZ4 4911 aaKnown RBP17.42■□□□□ 0.38
SSBP4-209ENST00000601357 IGKV1D-13A0A0B4J2D9 117 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 IGKV1-13P0DP09 117 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 CD36P16671 472 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 NEDD8Q15843 81 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 PRSS8Q16651 343 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 VMA21Q3ZAQ7 101 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 OVCH2Q7RTZ1 564 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 OR5H6Q8NGV6 325 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 ZNF355PQ9NSJ1 428 aa17.41■□□□□ 0.38
SSBP4-209ENST00000601357 LOC100506127A0A0U1RQW1 187 aa17.4■□□□□ 0.38
SSBP4-209ENST00000601357 SLC22A5O76082 557 aa17.4■□□□□ 0.38
SSBP4-209ENST00000601357 IDO2Q6ZQW0 420 aa17.4■□□□□ 0.38
SSBP4-209ENST00000601357 TINAGL1Q9GZM7 467 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-209ENST00000601357 RBMX2Q9Y388 322 aaKnown RBP17.4■□□□□ 0.38
SSBP4-209ENST00000601357 A0A0G2JLM5 398 aa17.39■□□□□ 0.37
SSBP4-209ENST00000601357 C13orf42A0A1B0GVH6 325 aa17.39■□□□□ 0.37
SSBP4-209ENST00000601357 J3QRK9 145 aa17.39■□□□□ 0.37
SSBP4-209ENST00000601357 TUSC2O75896 110 aa17.39■□□□□ 0.37
SSBP4-209ENST00000601357 RPL30P62888 115 aaKnown RBP17.39■□□□□ 0.37
SSBP4-209ENST00000601357 EIF4EBP1Q13541 118 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-209ENST00000601357 KCTD9Q7L273 389 aa17.39■□□□□ 0.37
SSBP4-209ENST00000601357 SORL1Q92673 2214 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 A0A0A6YYH2 397 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 MSGN1A6NI15 193 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 A6NJ64 397 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 LY86O95711 162 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 SAA1P0DJI8 122 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-209ENST00000601357 SPNP16150 400 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 AADACP22760 399 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 TNXAQ16473 311 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 IDNKQ5T6J7 187 aa17.38■□□□□ 0.37
SSBP4-209ENST00000601357 ADAD2Q8NCV1 583 aaKnown RBP17.38■□□□□ 0.37
SSBP4-209ENST00000601357 RANGRFQ9HD47 186 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-209ENST00000601357 TNCP24821 2201 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 TRAV18A0A075B6X5 111 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 FCGR3BO75015 233 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 CDK10Q15131 360 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 OR6Q1Q8NGQ2 317 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 SRSF12Q8WXF0 261 aaKnown RBP17.37■□□□□ 0.37
SSBP4-209ENST00000601357 WWC2-AS2Q96NR7 200 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 ZNF430Q9H8G1 570 aaPredicted RBP17.37■□□□□ 0.37
SSBP4-209ENST00000601357 PRELID3BQ9Y3B1 194 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 SMAD5-AS1Q9Y6J3 95 aa17.37■□□□□ 0.37
SSBP4-209ENST00000601357 TMEM127O75204 238 aa17.36■□□□□ 0.37
SSBP4-209ENST00000601357 RBMXL2O75526 392 aaKnown RBP17.36■□□□□ 0.37
SSBP4-209ENST00000601357 APELAP0DMC3 54 aa17.36■□□□□ 0.37
SSBP4-209ENST00000601357 ZP3P21754 424 aa17.36■□□□□ 0.37
SSBP4-209ENST00000601357 BRWD1-AS2P59051 145 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms