RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MPPED1O15442 326 aa12.55□□□□□ -0.4
USE1-208ENST00000600970 GLT8D1Q68CQ7 371 aa12.55□□□□□ -0.4
USE1-208ENST00000600970 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
USE1-208ENST00000600970 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
USE1-208ENST00000600970 LPAR5Q9H1C0 372 aa12.55□□□□□ -0.4
USE1-208ENST00000600970 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
USE1-208ENST00000600970 LOC102724200A0A096LPH7 203 aaPredicted RBP12.54□□□□□ -0.4
USE1-208ENST00000600970 TUSC2O75896 110 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 HLA-AP01891 365 aaKnown RBP12.54□□□□□ -0.4
USE1-208ENST00000600970 SRMP19623 302 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 CBX3Q13185 183 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 PRSS8Q16651 343 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 TEX45Q8NA69 505 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
USE1-208ENST00000600970 EFCAB10A6NFE3 127 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 LGALS9O00182 355 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 TMEM50BP56557 158 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 UBE2KP61086 200 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 TAGLNQ01995 201 aaKnown RBP12.53□□□□□ -0.4
USE1-208ENST00000600970 VMA21Q3ZAQ7 101 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 ACSM3Q53FZ2 586 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
USE1-208ENST00000600970 TTC23Q5W5X9 447 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 IDO2Q6ZQW0 420 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 TMEM61Q8N0U2 210 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 ACOT12Q8WYK0 555 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 C12orf4Q9NQ89 552 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 HSF4Q9ULV5 492 aa12.53□□□□□ -0.4
USE1-208ENST00000600970 FOXI3A8MTJ6 420 aaPredicted RBP12.52□□□□□ -0.41
USE1-208ENST00000600970 TRDCB7Z8K6 153 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 GGCTO75223 188 aaKnown RBP12.52□□□□□ -0.41
USE1-208ENST00000600970 DEDDO75618 318 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 OR2C1O95371 312 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 BPNT1O95861 308 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 CD3GP09693 182 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 CD37P11049 281 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 CBLN1P23435 193 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 WNT4P56705 351 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 TNFRSF9Q07011 255 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 RTL8BQ17RB0 113 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 LYG2Q86SG7 212 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 NECAP1Q8NC96 275 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 OR52B4Q8NGK2 314 aa12.52□□□□□ -0.41
USE1-208ENST00000600970 CMSS1Q9BQ75 279 aaKnown RBP12.52□□□□□ -0.41
USE1-208ENST00000600970 URM1Q9BTM9 101 aaKnown RBP12.52□□□□□ -0.41
USE1-208ENST00000600970 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
USE1-208ENST00000600970 KLK5Q9Y337 293 aaPredicted RBP12.52□□□□□ -0.41
USE1-208ENST00000600970 OR2J3O76001 311 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 NDUFB8O95169 186 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 RRASP10301 218 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 SERPINB10P48595 397 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 C15orf32Q32M92 178 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 FAM209BQ5JX69 171 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
USE1-208ENST00000600970 OR4A4PQ8NGN8 299 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 PHYHIPQ92561 330 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 ARHGAP5-AS1Q96IT6 56 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 PECRQ9BY49 303 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 MLXQ9UH92 298 aa12.51□□□□□ -0.41
USE1-208ENST00000600970 MYL12BO14950 172 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 CRYZL1O95825 349 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 GPHB5Q86YW7 130 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 PQLC1Q8N2U9 271 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 SPIN2AQ99865 258 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 SPIN2BQ9BPZ2 258 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 ZNF430Q9H8G1 570 aaPredicted RBP12.5□□□□□ -0.41
USE1-208ENST00000600970 TP53TG1Q9Y2A0 90 aa12.5□□□□□ -0.41
USE1-208ENST00000600970 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 BET1O15155 118 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
USE1-208ENST00000600970 TPBGQ13641 420 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 NANOGP1Q8N7R0 232 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 CABLES2Q9BTV7 478 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 S100A14Q9HCY8 104 aa12.49□□□□□ -0.41
USE1-208ENST00000600970 HECTD4Q9Y4D8 3996 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 LINC00473A8K010 186 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 FABP7O15540 132 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 SPRY2O43597 315 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 ACTL6BO94805 426 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 IGHV3-23P01764 117 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
USE1-208ENST00000600970 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
USE1-208ENST00000600970 BMI1P35226 326 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 P2RY14Q15391 338 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 ANKRD55Q3KP44 614 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 TM4SF20Q53R12 229 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 PLAC9Q5JTB6 97 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 LGALS9CQ6DKI2 356 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 Q6ZWC4 215 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 SLC25A42Q86VD7 318 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms