RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RTL8BQ17RB0 113 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 ABCA11PQ4W5N1 156 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 TMEM128Q5BJH2 165 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 SLC25A42Q86VD7 318 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 CADM3Q8N126 398 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 OR8H1Q8NGG4 311 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 GALNT14Q96FL9 552 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 SSX3Q99909 188 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 LIN7CQ9NUP9 197 aaKnown RBP9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 PITPNC1Q9UKF7 332 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 WASHC3Q9Y3C0 194 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 NUBP2Q9Y5Y2 271 aa9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
CHMP2A-207ENST00000600804 PLXNB1O43157 2135 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 CRYM-AS1A6NIL9 109 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 H0Y980 276 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 MOSP00540 346 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 BRWD1-AS2P59051 145 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 PHLDA2Q53GA4 152 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 PDLIM3Q53GG5 364 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 TMEM177Q53S58 311 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 C11orf88Q6PI97 169 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 RBMS3Q6XE24 437 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 C16orf82Q7Z2V1 217 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 NRARPQ7Z6K4 114 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 MOB3BQ86TA1 216 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 TBC1D26Q86UD7 250 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 CENPSQ8N2Z9 138 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 Q8N6K4 173 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 SIGLECL1Q8N7X8 197 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 DRAXINQ8NBI3 349 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 OR4C13Q8NGP0 309 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 OR2T10Q8NGZ9 312 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 ENKURQ8TC29 256 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 C22orf15Q8WYQ4 148 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 ZDHHC16Q969W1 377 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 NAA60Q9H7X0 242 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 SLC35D1Q9NTN3 355 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 TCF19Q9Y242 345 aa9.32□□□□□ -0.92
CHMP2A-207ENST00000600804 PIGBOS1A0A0B4J2F0 54 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 MDFIC2A0A1B0GVS7 189 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 A6NDX4 124 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 RLN1P04808 185 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 RPA2P15927 270 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 PI3P19957 117 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 LGALS7P47929 136 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 UBA52P62987 128 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 CBX3Q13185 183 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 SGPP2Q8IWX5 399 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 OR4S2Q8NH73 311 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 TCTEX1D2Q8WW35 142 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 TAF15Q92804 592 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 EAF1Q96JC9 268 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 JMJD8Q96S16 334 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 AIFM2Q9BRQ8 373 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 ZNF747Q9BV97 191 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 C20orf85Q9H1P6 137 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 PLEKHA2Q9HB19 425 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
CHMP2A-207ENST00000600804 C3orf85A0A1B0GTC6 90 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 BTBD17A6NE02 478 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 H3BUX3 64 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 M0QZK8 103 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 TNFSF12O43508 249 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 PEX14O75381 377 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 OR2F2O95006 317 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 SPDEFO95238 335 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 HPRT1P00492 218 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 IGKV1D-33P01593 117 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 IGKV1-33P01594 117 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 IGKV1-16P04430 117 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 SNRNP70P08621 437 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 UCP1P25874 307 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 PAX6P26367 422 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 LINC00205P59089 165 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 SUPT4H1P63272 117 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 DEFA6Q01524 100 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 POU2AF1Q16633 256 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 RGS21Q2M5E4 152 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 ZNF585BQ52M93 769 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 PLET1Q6UQ28 207 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 GLDNQ6ZMI3 551 aaPredicted RBP9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 SPAG16Q8N0X2 631 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 NPBQ8NG41 125 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 OR51H1Q8NH63 302 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 FLYWCH2Q96CP2 140 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 RAB18Q9NP72 206 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 NUDT15Q9NV35 164 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 COMMD9Q9P000 198 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 VPREB3Q9UKI3 123 aa9.3□□□□□ -0.92
CHMP2A-207ENST00000600804 IGHV3-72A0A0B4J1Y9 119 aa9.29□□□□□ -0.92
CHMP2A-207ENST00000600804 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
CHMP2A-207ENST00000600804 H7C2Y5 167 aa9.29□□□□□ -0.92
CHMP2A-207ENST00000600804 ARPC1BO15143 372 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms