RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ZNF562Q6V9R5 426 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 SNX29P2Q8IUI4 249 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 AP3S1Q92572 193 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 GON7Q9BXV9 100 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 KLK15Q9H2R5 256 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
RPS28-203ENST00000600659 TRAV41A0A0B4J266 112 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 G3V4G9 280 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 SLC22A5O76082 557 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 CRYZL1O95825 349 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 RRASP10301 218 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 LGALS7P47929 136 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 DYRK1AQ13627 763 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 MZT2AQ6P582 158 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 KCTD9Q7L273 389 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 CLCC1Q96S66 551 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 FAM103A1Q9BTL3 118 aaKnown RBP12.29□□□□□ -0.44
RPS28-203ENST00000600659 IFT46Q9NQC8 304 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 CCDC59Q9P031 241 aaKnown RBP12.29□□□□□ -0.44
RPS28-203ENST00000600659 MRPS7Q9Y2R9 242 aaKnown RBP12.29□□□□□ -0.44
RPS28-203ENST00000600659 CEPT1Q9Y6K0 416 aa12.29□□□□□ -0.44
RPS28-203ENST00000600659 CTDSP2O14595 271 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 PF4V1P10720 104 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 RFX2P48378 723 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 PLGLAQ15195 96 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 OR2B11Q5JQS5 317 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 KPRPQ5T749 579 aaPredicted RBP12.28□□□□□ -0.44
RPS28-203ENST00000600659 DHRS11Q6UWP2 260 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 C1QL4Q86Z23 238 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 LAX1Q8IWV1 398 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 SECTM1Q8WVN6 248 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 ISOC1Q96CN7 298 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 P2RX4Q99571 388 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 FXYD6Q9H0Q3 95 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 RBM38Q9H0Z9 239 aaKnown RBP12.28□□□□□ -0.44
RPS28-203ENST00000600659 SCPEP1Q9HB40 452 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 EHFQ9NZC4 300 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 EXTL2Q9UBQ6 330 aa12.28□□□□□ -0.44
RPS28-203ENST00000600659 SHOXO15266 292 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 FCGR3BO75015 233 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 PMP2P02689 132 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 HRH1P35367 487 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 CDX1P47902 265 aaPredicted RBP12.27□□□□□ -0.45
RPS28-203ENST00000600659 FXYD4P59646 89 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 UBE2KP61086 200 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 ECSCRQ19T08 205 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 BEAN1Q3B7T3 259 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 CXorf66Q5JRM2 361 aaPredicted RBP12.27□□□□□ -0.45
RPS28-203ENST00000600659 ASPHD1Q5U4P2 390 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 IDO2Q6ZQW0 420 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 ZNF818PQ6ZRF7 136 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 MFSD4AQ8N468 514 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 KLHL30-AS1Q8NEE0 82 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.45
RPS28-203ENST00000600659 MOB3AQ96BX8 217 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 ABHD1Q96SE0 405 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 HSD17B10Q99714 261 aaKnown RBP12.27□□□□□ -0.45
RPS28-203ENST00000600659 SLIRPQ9GZT3 109 aaKnown RBP12.27□□□□□ -0.45
RPS28-203ENST00000600659 TAS2R8Q9NYW2 309 aa12.27□□□□□ -0.45
RPS28-203ENST00000600659 FAM25AB3EWG3 89 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 FAM25CB3EWG5 89 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 FAM25GB3EWG6 89 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 SULT1C2O00338 296 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 TNFSF12O43508 249 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 SAA1P0DJI8 122 aaPredicted RBP12.26□□□□□ -0.45
RPS28-203ENST00000600659 HLA-DMAP28067 261 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 GNRHRP30968 328 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 DEFA6Q01524 100 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 OXLD1Q5BKU9 147 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 ZNF66Q6ZN08 573 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 ZNF695Q8IW36 515 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
RPS28-203ENST00000600659 TEX45Q8NA69 505 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 RAX2Q96IS3 184 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 ZNF2Q9BSG1 426 aaPredicted RBP12.26□□□□□ -0.45
RPS28-203ENST00000600659 SLC5A7Q9GZV3 580 aa12.26□□□□□ -0.45
RPS28-203ENST00000600659 SMIM31A0A1B0GVY4 71 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 A0A1W2PN81 502 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 WIPF1O43516 503 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 SLC6A1P30531 599 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 RCVRNP35243 200 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 CHRNA7P36544 502 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 TAS2R46P59540 309 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 FXYD3Q14802 87 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 PRSS8Q16651 343 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 DEFB136Q30KP8 78 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 AKIRIN2Q53H80 203 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 TMEM17Q86X19 198 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 TCTEX1D1Q8N7M0 179 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 ZBTB34Q8NCN2 500 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms