RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 UBE2KP61086 200 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 GNB2P62879 340 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 ABHD12Q8N2K0 398 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 CXorf58Q96LI9 332 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 RAB40CQ96S21 281 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 COA4Q9NYJ1 87 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 UTP20O75691 2785 aaKnown RBP12.4□□□□□ -0.42
HIF3A-218ENST00000600383 ARHGAP32A7KAX9 2087 aa12.4□□□□□ -0.42
HIF3A-218ENST00000600383 GPR37O15354 613 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 P0C879 139 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 GPR6P46095 362 aaPredicted RBP12.4□□□□□ -0.43
HIF3A-218ENST00000600383 ERVK-16P61578 105 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 TNFRSF9Q07011 255 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 SPINK9Q5DT21 86 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 OR4S2Q8NH73 311 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 PSENENQ9NZ42 101 aa12.4□□□□□ -0.43
HIF3A-218ENST00000600383 LINC00862A6NCI5 91 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
HIF3A-218ENST00000600383 OR9G9P0C7N8 305 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 MMP9P14780 707 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 NQO2P16083 231 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 KIR2DS2P43631 304 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 EFNA4P52798 201 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 OR2B8PP59922 312 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
HIF3A-218ENST00000600383 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 MIDNQ504T8 468 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 ZNF295-AS1Q8N0V1 137 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 OR5C1Q8NGR4 320 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 SLC25A32Q9H2D1 315 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 RBKSQ9H477 322 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 ONECUT1Q9UBC0 465 aa12.39□□□□□ -0.43
HIF3A-218ENST00000600383 A0A1W2PPH5 198 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 TAGLNQ01995 201 aaKnown RBP12.38□□□□□ -0.43
HIF3A-218ENST00000600383 TMEM267Q0VDI3 215 aaPredicted RBP12.38□□□□□ -0.43
HIF3A-218ENST00000600383 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 OR9G1Q8NH87 305 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 TMEM133Q9H2Q1 129 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 BORCS7-ASMTA0A0B4J1R7 106 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 LEUTXA8MZ59 168 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 H7C2Y5 167 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 DYNLT3P51808 116 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 OR4A16Q8NH70 328 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
HIF3A-218ENST00000600383 HSPB7Q9UBY9 170 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 WSB1Q9Y6I7 421 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 MED13LQ71F56 2210 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 ASH1LQ9NR48 2969 aaKnown RBP12.38□□□□□ -0.43
HIF3A-218ENST00000600383 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
HIF3A-218ENST00000600383 TRAV3A0A0B4J244 114 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 C22orf46C9J442 243 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 IFNA17P01571 189 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 GAPDHP04406 335 aaKnown RBP12.37□□□□□ -0.43
HIF3A-218ENST00000600383 IGKV1-16P04430 117 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 ZNF833PQ6ZTB9 187 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 STX12Q86Y82 276 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 ZNF525Q8N782 197 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 RHOVQ96L33 236 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 SSBP3Q9BWW4 388 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-218ENST00000600383 QTRT1Q9BXR0 403 aaKnown RBP12.37□□□□□ -0.43
HIF3A-218ENST00000600383 MRPL20Q9BYC9 149 aaKnown RBP12.37□□□□□ -0.43
HIF3A-218ENST00000600383 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 CEBPZOSA8MTT3 80 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 FAM90A26D6RGX4 464 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 TXNL1O43396 289 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 METTL15P1P0C7V9 234 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 ARF6P62330 175 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
HIF3A-218ENST00000600383 MED6O75586 246 aa12.36□□□□□ -0.43
HIF3A-218ENST00000600383 LIPFP07098 398 aa12.36□□□□□ -0.43
HIF3A-218ENST00000600383 COX7A1P24310 79 aa12.36□□□□□ -0.43
HIF3A-218ENST00000600383 OR13D1Q8NGV5 346 aa12.36□□□□□ -0.43
HIF3A-218ENST00000600383 SMIM8Q96KF7 97 aa12.36□□□□□ -0.43
HIF3A-218ENST00000600383 SPG11Q96JI7 2443 aa12.36□□□□□ -0.43
HIF3A-218ENST00000600383 LOC105371242A0A075B767 164 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 A0A087X0M5 115 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 A0A1B0GX30 115 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 hCG_1809904A0A1W2PP81 198 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 A0A1W2PPE2 198 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 A0A1W2PR64 198 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 A0A1W2PRV1 198 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 RRASP10301 218 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 SULT1A1P50225 295 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 EIF5AL1Q6IS14 154 aaKnown RBP12.35□□□□□ -0.43
HIF3A-218ENST00000600383 DTD1Q8TEA8 209 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 RNF141Q8WVD5 230 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 TMEM186Q96B77 213 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 A1L4Q6 167 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 HRASP01112 189 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 BAXQ07812 192 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms