RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SDHCQ99643 169 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-210ENST00000600286 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-210ENST00000600286 PRSS22Q9GZN4 317 aa13.36□□□□□ -0.27
USHBP1-210ENST00000600286 SHOXO15266 292 aa13.35□□□□□ -0.27
USHBP1-210ENST00000600286 FGF16O43320 207 aa13.35□□□□□ -0.27
USHBP1-210ENST00000600286 FCGR3BO75015 233 aa13.35□□□□□ -0.27
USHBP1-210ENST00000600286 PGLYRP1O75594 196 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-210ENST00000600286 IGLV2-14P01704 120 aa13.35□□□□□ -0.27
USHBP1-210ENST00000600286 PLGLAQ15195 96 aa13.35□□□□□ -0.27
USHBP1-210ENST00000600286 OR51H1Q8NH63 302 aa13.35□□□□□ -0.27
USHBP1-210ENST00000600286 RANBP3Q9H6Z4 567 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-210ENST00000600286 LIN7CQ9NUP9 197 aaKnown RBP13.35□□□□□ -0.27
USHBP1-210ENST00000600286 LINC00473A8K010 186 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 NBR2O15453 112 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 CTSDP07339 412 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-210ENST00000600286 MZT2BQ6NZ67 158 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 SPAG16Q8N0X2 631 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 OR13C8Q8NGS7 320 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 OR4F5Q8NH21 305 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 OSR1Q8TAX0 266 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-210ENST00000600286 C5orf30Q96GV9 206 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
USHBP1-210ENST00000600286 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
USHBP1-210ENST00000600286 CRYZL1O95825 349 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 HRASP01112 189 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 RLN1P04808 185 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 PIGPP57054 158 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 LINC00205P59089 165 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 DEFA1P59665 94 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 DEFA3P59666 94 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 RND3P61587 244 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 RPL30P62888 115 aaKnown RBP13.33□□□□□ -0.28
USHBP1-210ENST00000600286 SRSF2Q01130 221 aaKnown RBP13.33□□□□□ -0.28
USHBP1-210ENST00000600286 VMA21Q3ZAQ7 101 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 TMEM177Q53S58 311 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 OR2B11Q5JQS5 317 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 C9orf152Q5JTZ5 239 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 TBC1D26Q86UD7 250 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 Q8N6K4 173 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 DDB2Q92466 427 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 HARBI1Q96MB7 349 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 SLC2A9Q9NRM0 540 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 GPR132Q9UNW8 380 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 KCNIP3Q9Y2W7 256 aa13.33□□□□□ -0.28
USHBP1-210ENST00000600286 A0A1B0GUS0 222 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 MPPED1O15442 326 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 RBFOX2O43251 390 aaKnown RBP eCLIP13.32□□□□□ -0.28
USHBP1-210ENST00000600286 LYRM1O43325 122 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 CHST1O43916 411 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 PEX14O75381 377 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 B3GALNT1O75752 331 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 UPK1BO75841 260 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 SPDEFO95238 335 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 IGKV1-16P04430 117 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 SERPINE2P07093 398 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 HKR1P10072 659 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 F2RP25116 425 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 RAG2P55895 527 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 FOXL1Q12952 345 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 EIF4EBP1Q13541 118 aaPredicted RBP13.32□□□□□ -0.28
USHBP1-210ENST00000600286 RBMS2Q15434 407 aaKnown RBP13.32□□□□□ -0.28
USHBP1-210ENST00000600286 NPBQ8NG41 125 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 OR2T6Q8NHC8 308 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 BEX1Q9HBH7 125 aa13.32□□□□□ -0.28
USHBP1-210ENST00000600286 RRHO14718 337 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 ATG12O94817 140 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 NDUFA7O95182 113 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 HPRT1P00492 218 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 PI3P19957 117 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 F2RL1P55085 397 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 KRTAP24-1Q3LI83 254 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 LIN54Q6MZP7 749 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 SGPP2Q8IWX5 399 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 VSTM2AQ8TAG5 236 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 GPHA2Q96T91 129 aa13.31□□□□□ -0.28
USHBP1-210ENST00000600286 FAM212BQ9NTI7 297 aaPredicted RBP13.31□□□□□ -0.28
USHBP1-210ENST00000600286 CREBL2O60519 120 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-210ENST00000600286 TSPAN9O75954 239 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 ANXA3P12429 323 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 ERVK-16P61578 105 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 PSG5Q15238 335 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 C5orf64Q2M2E5 130 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-210ENST00000600286 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 PLSCR3Q9NRY6 295 aa13.3□□□□□ -0.28
USHBP1-210ENST00000600286 METTL1Q9UBP6 276 aaKnown RBP13.3□□□□□ -0.28
USHBP1-210ENST00000600286 PIGBOS1A0A0B4J2F0 54 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 C3orf85A0A1B0GTC6 90 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 FAM240BA0A1B0GVZ2 78 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 KCNAB3O43448 404 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 NDUFA3O95167 84 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 RPA2P15927 270 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 NQO2P16083 231 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 AKR1C4P17516 323 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 LPAR6P43657 344 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 TAS2R31P59538 309 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 BLCAPP62952 87 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 Q6ZSV7 163 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
USHBP1-210ENST00000600286 Q8N9W7 124 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms