RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 A0A1B0GUS0 222 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 NDUFA3O95167 84 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 RRASP10301 218 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 CNTFRP26992 372 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 MMDQ15546 238 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 RTL8BQ17RB0 113 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 ABCA11PQ4W5N1 156 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 LPCAT3Q6P1A2 487 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 Q6ZS46 218 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 RSRP1Q9BUV0 290 aa14.43□□□□□ -0.1
LIG1-216ENST00000598938 SH2D7A6NKC9 451 aaPredicted RBP14.42□□□□□ -0.1
LIG1-216ENST00000598938 DISC1C4P0D8 188 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 NBR2O15453 112 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 TNFSF12O43508 249 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 AP3S2P59780 193 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 CBX3Q13185 183 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 BAK1Q16611 211 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 TMEM177Q53S58 311 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 TERB2Q8NHR7 220 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 TCTEX1D2Q8WW35 142 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 FLYWCH2Q96CP2 140 aaKnown RBP14.42□□□□□ -0.1
LIG1-216ENST00000598938 GPHA2Q96T91 129 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 LIN7CQ9NUP9 197 aaKnown RBP14.42□□□□□ -0.1
LIG1-216ENST00000598938 SIGLEC9Q9Y336 463 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 PRELID3BQ9Y3B1 194 aa14.42□□□□□ -0.1
LIG1-216ENST00000598938 GPR31O00270 319 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 BRWD1-AS2P59051 145 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 SCGB2B2Q4G0G5 96 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 SLC38A6Q8IZM9 456 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 TOMM5Q8N4H5 51 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 OR2T6Q8NHC8 308 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 DEDD2Q8WXF8 326 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 MRGPRFQ96AM1 343 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 TSNAXQ99598 290 aaKnown RBP14.41□□□□□ -0.1
LIG1-216ENST00000598938 RASL11BQ9BPW5 248 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 SERTAD4Q9NUC0 356 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 SLC2A8Q9NY64 477 aa14.41□□□□□ -0.1
LIG1-216ENST00000598938 NOTCH1P46531 2555 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 FCGR3BO75015 233 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 PGLYRP1O75594 196 aaPredicted RBP14.4□□□□□ -0.1
LIG1-216ENST00000598938 SPDEFO95238 335 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 KIR2DS2P43631 304 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 PROK1P58294 105 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 RPS16P62249 146 aaKnown RBP14.4□□□□□ -0.1
LIG1-216ENST00000598938 C5orf64Q2M2E5 130 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 CMTM1Q8IZ96 169 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 OR51S1Q8NGJ8 323 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 S100ZQ8WXG8 99 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 PRRT1Q99946 306 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 HRASLSQ9HDD0 168 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 KIAA1456Q9P272 454 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 RNF114Q9Y508 228 aa14.4□□□□□ -0.1
LIG1-216ENST00000598938 RRHO14718 337 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 PEX14O75381 377 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 CRYZL1O95825 349 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 IGLV2-23P01705 113 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 RLN1P04808 185 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 PGAM2P15259 253 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 FAUP35544 74 aaKnown RBP14.39□□□□□ -0.11
LIG1-216ENST00000598938 ECI1P42126 302 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 LGALS7P47929 136 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 PPP5CP53041 499 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 CATR1Q13166 79 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 PSG5Q15238 335 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 OR2B11Q5JQS5 317 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 TRIQKQ629K1 86 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 OR4S2Q8NH73 311 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 OSR1Q8TAX0 266 aaPredicted RBP14.39□□□□□ -0.11
LIG1-216ENST00000598938 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
LIG1-216ENST00000598938 HARBI1Q96MB7 349 aa14.39□□□□□ -0.11
LIG1-216ENST00000598938 SHOXO15266 292 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 RBFOX2O43251 390 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIG1-216ENST00000598938 IGHG2P01859 326 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 HLA-DRB1P01911 266 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 IL7P13232 177 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 VDAC2P45880 294 aaPredicted RBP14.38□□□□□ -0.11
LIG1-216ENST00000598938 RND3P61587 244 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 TMEM95Q3KNT9 176 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 PHLDA2Q53GA4 152 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 C9orf152Q5JTZ5 239 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 OR13C8Q8NGS7 320 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 OR51H1Q8NH63 302 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 MARCH1Q8TCQ1 289 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 FBXL15Q9H469 300 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 MCUBQ9NWR8 336 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 SCP2D1Q9UJQ7 156 aa14.38□□□□□ -0.11
LIG1-216ENST00000598938 SRRM4A7MD48 611 aaKnown RBP14.37□□□□□ -0.11
LIG1-216ENST00000598938 S100GP29377 79 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 SURF2Q15527 256 aaPredicted RBP14.37□□□□□ -0.11
LIG1-216ENST00000598938 ARSJQ5FYB0 599 aaPredicted RBP14.37□□□□□ -0.11
LIG1-216ENST00000598938 ZNF57Q68EA5 555 aaPredicted RBP14.37□□□□□ -0.11
LIG1-216ENST00000598938 IDO2Q6ZQW0 420 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 SPAG16Q8N0X2 631 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 ZFAND1Q8TCF1 268 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 HSPB9Q9BQS6 159 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 WNT10AQ9GZT5 417 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 SLC2A9Q9NRM0 540 aa14.37□□□□□ -0.11
LIG1-216ENST00000598938 METTL1Q9UBP6 276 aaKnown RBP14.37□□□□□ -0.11
LIG1-216ENST00000598938 SLC25A17O43808 307 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms