RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MARCH11A6NNE9 402 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 LYNX1G3V0Z9 82 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 SAA2P0DJI9 122 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 LYNX1P0DP58 116 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 RAB7AP51149 207 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 UBE2KP61086 200 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 ZNF251Q9BRH9 671 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 RBKSQ9H477 322 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 ZNRD1Q9P1U0 126 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 HSPB7Q9UBY9 170 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 RPUSD1Q9UJJ7 312 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 LRRK2Q5S007 2527 aa14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 KRBOX1C9JBD0 128 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 FAM90A26D6RGX4 464 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 RAB29O14966 203 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 ATG12O94817 140 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 CCL3L1P16619 93 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 SULT1A1P50225 295 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 SRSF3P84103 164 aaKnown RBP14□□□□□ -0.17
SHKBP1-216ENST00000598201 ZNF266Q14584 549 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 TMEM200BQ69YZ2 307 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 H2BFWTQ7Z2G1 175 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 BPIFCQ8NFQ6 507 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 CD300LFQ8TDQ1 290 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 R3HDM4Q96D70 268 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 RBMXL1Q96E39 390 aaKnown RBP14□□□□□ -0.17
SHKBP1-216ENST00000598201 CTNNBIP1Q9NSA3 81 aaPredicted RBP14□□□□□ -0.17
SHKBP1-216ENST00000598201 GAB2Q9UQC2 676 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 KLF2Q9Y5W3 355 aaPredicted RBP14□□□□□ -0.17
SHKBP1-216ENST00000598201 DANCRP0C864 163 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 FHITP49789 147 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 AKR1C1Q04828 323 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 MEF2CQ06413 473 aaPredicted RBP14□□□□□ -0.17
SHKBP1-216ENST00000598201 ARL16Q0P5N6 197 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 Q6ZRG5 221 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 HAPLN4Q86UW8 402 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 STX12Q86Y82 276 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 LYG1Q8N1E2 194 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 DDB2Q92466 427 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 MMP26Q9NRE1 261 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 LAMP3Q9UQV4 416 aa14□□□□□ -0.17
SHKBP1-216ENST00000598201 RAB19A4D1S5 217 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 DVL1O14640 695 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 NDUFA2O43678 99 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 METTL15P1P0C7V9 234 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 COL8A2P25067 703 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 ATP6V0CP27449 155 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 BTNL8Q6UX41 500 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 H1FXQ92522 213 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 HCFC1P51610 2035 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 C19orf84I3L1E1 186 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 NDUFB3O43676 98 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 HPRT1P00492 218 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 OR9G9P0C7N8 305 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 MRPS11P82912 194 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 SPANXN5Q5MJ07 72 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 VKORC1L1Q8N0U8 176 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 ATP5SQ99766 215 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 PARP11Q9NR21 331 aa13.99□□□□□ -0.17
SHKBP1-216ENST00000598201 A1L4Q6 167 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 TAS2R30P59541 319 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 BLOC1S1P78537 153 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 HFEQ30201 348 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 LRRC10Q5BKY1 277 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 TMEM182Q6ZP80 229 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 SLC25A48Q6ZT89 311 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 SSX9Q7RTT3 188 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 ZNF714Q96N38 554 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 S1PR3Q99500 378 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 KAAG1Q9UBP8 84 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 CACFD1Q9UGQ2 172 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 LRBAP50851 2863 aa13.98□□□□□ -0.17
SHKBP1-216ENST00000598201 RBFOX2O43251 390 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 RUNX1Q01196 453 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 PJVKQ0ZLH3 352 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 SPINK9Q5DT21 86 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 ZNF383Q8NA42 475 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 ZDHHC16Q969W1 377 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 GAL3ST2Q9H3Q3 398 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 PRELID3BQ9Y3B1 194 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 TMEM30BQ3MIR4 351 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 UQCC3Q6UW78 93 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 HEPN1Q6WQI6 88 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 IL34Q6ZMJ4 242 aa13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 QTRT1Q9BXR0 403 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-216ENST00000598201 RBMXL2O75526 392 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 OR2B8PP59922 312 aa13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 OR2G3Q8NGZ4 309 aa13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 LYPD6BQ8NI32 183 aa13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 NARS2Q96I59 477 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 OR4C12Q96R67 309 aa13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 TMEM231Q9H6L2 316 aa13.96□□□□□ -0.17
SHKBP1-216ENST00000598201 HRNRQ86YZ3 2850 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 DOCK11Q5JSL3 2073 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 AGPAT2O15120 278 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 TMEM14EPQ6UXP3 125 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 ZNF525Q8N782 197 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 TSNAXQ99598 290 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 MS4A7Q9GZW8 240 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms