RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 MRGPRFQ96AM1 343 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 ZNF486Q96H40 463 aaPredicted RBP17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 RNF5Q99942 180 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 C14orf166Q9Y224 244 aaKnown RBP17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 SHOXO15266 292 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 CNTFRP26992 372 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 BLCAPP62952 87 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 SURF2Q15527 256 aaPredicted RBP17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 C9orf152Q5JTZ5 239 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 SPAG16Q8N0X2 631 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 SCGB3A2Q96PL1 93 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 TSNAXQ99598 290 aaKnown RBP17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 RASL11BQ9BPW5 248 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 C7orf50Q9BRJ6 194 aaKnown RBP17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 PRSS22Q9GZN4 317 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 SLC2A9Q9NRM0 540 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 PLSCR3Q9NRY6 295 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 KIAA1456Q9P272 454 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 COPZ2Q9P299 210 aa17.62■□□□□ 0.41
CHMP2A-204ENST00000597848 SH2D7A6NKC9 451 aaPredicted RBP17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 NBR2O15453 112 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 FGF16O43320 207 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 CTSDP07339 412 aaPredicted RBP17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 PIGPP57054 158 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 TMEM177Q53S58 311 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 Q6ZSV7 163 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 TBC1D26Q86UD7 250 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 C5orf56Q8N8D9 126 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 OR4S2Q8NH73 311 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 HARBI1Q96MB7 349 aa17.61■□□□□ 0.41
CHMP2A-204ENST00000597848 HKR1P10072 659 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 LGALS7P47929 136 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 RAG2P55895 527 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 RELBQ01201 579 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 PLGLAQ15195 96 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 ARSJQ5FYB0 599 aaPredicted RBP17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 C11orf88Q6PI97 169 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 Q8N9W7 124 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 CCDC71LQ8N9Z2 235 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 NPBQ8NG41 125 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 C19orf24Q9BVV8 132 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 RANBP3Q9H6Z4 567 aaPredicted RBP17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 GPR132Q9UNW8 380 aa17.6■□□□□ 0.41
CHMP2A-204ENST00000597848 CUBNO60494 3623 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 MPPED1O15442 326 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 PLA2G10O15496 165 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 UPK1BO75841 260 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 NDUFA7O95182 113 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 AMY1AP04745 511 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 F2RP25116 425 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 CCR6P51684 374 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 BRWD1-AS2P59051 145 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 RND3P61587 244 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 PSG5Q15238 335 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 OR4F5Q8NH21 305 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 OSR1Q8TAX0 266 aaPredicted RBP17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 CD300LFQ8TDQ1 290 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 RTBDNQ9BSG5 229 aaPredicted RBP17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 FBXL15Q9H469 300 aa17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 LIN7CQ9NUP9 197 aaKnown RBP17.59■□□□□ 0.41
CHMP2A-204ENST00000597848 RRHO14718 337 aa17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 LYRM1O43325 122 aa17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 RAMP3O60896 148 aa17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 TSPAN9O75954 239 aa17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 SLC25A21Q9BQT8 299 aaPredicted RBP17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 C5orf66Q9H5L9 145 aa17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 METTL1Q9UBP6 276 aaKnown RBP17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 VSIG4Q9Y279 399 aa17.58■□□□□ 0.4
CHMP2A-204ENST00000597848 TEX13DA0A0J9YY54 714 aaPredicted RBP17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 RBFOX2O43251 390 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 SLC25A17O43808 307 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 NDUFA3O95167 84 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 LPAR6P43657 344 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 C5orf64Q2M2E5 130 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 Q6ZS46 218 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 FAM71E2Q8N5Q1 922 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 TCTEX1D1Q8N7M0 179 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 OR2T6Q8NHC8 308 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 TSC22D3Q99576 134 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 ZNF702PQ9H963 129 aa17.57■□□□□ 0.4
CHMP2A-204ENST00000597848 SRRM4A7MD48 611 aaKnown RBP17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 SPDEFO95238 335 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 IGLV2-23P01705 113 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 FOXL1Q12952 345 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 RBMS2Q15434 407 aaKnown RBP17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 VMA21Q3ZAQ7 101 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 LIN54Q6MZP7 749 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 TMED4Q7Z7H5 227 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 CLCC1Q96S66 551 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 C16orf95Q9H693 158 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 BEX1Q9HBH7 125 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 SIGLEC9Q9Y336 463 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 ATRQ13535 2644 aa17.56■□□□□ 0.4
CHMP2A-204ENST00000597848 TMEM89A2RUT3 159 aa17.55■□□□□ 0.4
CHMP2A-204ENST00000597848 HPRT1P00492 218 aa17.55■□□□□ 0.4
CHMP2A-204ENST00000597848 HRASP01112 189 aa17.55■□□□□ 0.4
CHMP2A-204ENST00000597848 ADAD2Q8NCV1 583 aaKnown RBP17.55■□□□□ 0.4
CHMP2A-204ENST00000597848 C3orf85A0A1B0GTC6 90 aa17.54■□□□□ 0.4
CHMP2A-204ENST00000597848 S1PR2O95136 353 aa17.54■□□□□ 0.4
CHMP2A-204ENST00000597848 SERPINE2P07093 398 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms