RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 DEFA5Q01523 94 aa10.07□□□□□ -0.8
LIG1-212ENST00000596549 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
LIG1-212ENST00000596549 FXYD3Q14802 87 aa10.07□□□□□ -0.8
LIG1-212ENST00000596549 ARL6IP1Q15041 203 aa10.07□□□□□ -0.8
LIG1-212ENST00000596549 DLX4Q92988 240 aaPredicted RBP10.07□□□□□ -0.8
LIG1-212ENST00000596549 MS4A10Q96PG2 267 aa10.07□□□□□ -0.8
LIG1-212ENST00000596549 LSM4Q9Y4Z0 139 aaKnown RBP10.07□□□□□ -0.8
LIG1-212ENST00000596549 LOC100506127A0A0U1RQW1 187 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 LINC01619G3V211 115 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 J3QRK9 145 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 OVOL1O14753 267 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 CD36P16671 472 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 NFYAP23511 347 aaPredicted RBP10.06□□□□□ -0.8
LIG1-212ENST00000596549 ECI1P42126 302 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 RTL8BQ17RB0 113 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 IDO2Q6ZQW0 420 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 POC5Q8NA72 575 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 RHOVQ96L33 236 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 ST6GALNAC5Q9BVH7 336 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 DCSTAMPQ9H295 470 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 SLA2Q9H6Q3 261 aa10.06□□□□□ -0.8
LIG1-212ENST00000596549 RBM7Q9Y580 266 aaKnown RBP10.06□□□□□ -0.8
LIG1-212ENST00000596549 SHOXO15266 292 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 SCGNO76038 276 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 CRYZL1O95825 349 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 HLA-DQB1P01920 261 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 TRGV3P03979 118 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 LGALS7P47929 136 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 SCAND1P57086 179 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 GNG2P59768 71 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 RPL30P62888 115 aaKnown RBP10.05□□□□□ -0.8
LIG1-212ENST00000596549 CD69Q07108 199 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 EIF4EBP1Q13541 118 aaPredicted RBP10.05□□□□□ -0.8
LIG1-212ENST00000596549 KCTD9Q7L273 389 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 ANXA10Q9UJ72 324 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 ZNF256Q9Y2P7 627 aaPredicted RBP10.05□□□□□ -0.8
LIG1-212ENST00000596549 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 ETV7Q9Y603 341 aa10.05□□□□□ -0.8
LIG1-212ENST00000596549 H3BUA1 57 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 RBMXL2O75526 392 aaKnown RBP10.04□□□□□ -0.8
LIG1-212ENST00000596549 TUSC2O75896 110 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 SAA1P0DJI8 122 aaPredicted RBP10.04□□□□□ -0.8
LIG1-212ENST00000596549 APELAP0DMC3 54 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 RRASP10301 218 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 PTHLHP12272 177 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 INSL3P51460 131 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 UBE2KP61086 200 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 PITPNAQ00169 270 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
LIG1-212ENST00000596549 CBX3Q13185 183 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 OR2B11Q5JQS5 317 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 VAX1Q5SQQ9 334 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 IDNKQ5T6J7 187 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 ACSM6Q6P461 480 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 CNIH2Q6PI25 160 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 OVCH2Q7RTZ1 564 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 ADTRPQ96IZ2 230 aa10.04□□□□□ -0.8
LIG1-212ENST00000596549 ZMAT5Q9UDW3 170 aaKnown RBP10.04□□□□□ -0.8
LIG1-212ENST00000596549 RBMX2Q9Y388 322 aaKnown RBP10.04□□□□□ -0.8
LIG1-212ENST00000596549 TNCP24821 2201 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 SAP30O75446 220 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 CNIH1O95406 144 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 HSPB1P04792 205 aaKnown RBP10.03□□□□□ -0.8
LIG1-212ENST00000596549 DCTN2Q13561 401 aaKnown RBP10.03□□□□□ -0.8
LIG1-212ENST00000596549 TNXAQ16473 311 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 PRSS8Q16651 343 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 VMA21Q3ZAQ7 101 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 OR5T1Q8NG75 326 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 OSR1Q8TAX0 266 aaPredicted RBP10.03□□□□□ -0.8
LIG1-212ENST00000596549 SRSF12Q8WXF0 261 aaKnown RBP10.03□□□□□ -0.8
LIG1-212ENST00000596549 GPHA2Q96T91 129 aa10.03□□□□□ -0.8
LIG1-212ENST00000596549 TRAV18A0A075B6X5 111 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 FCGR3BO75015 233 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 CTXN2P0C2S0 81 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 BRWD1-AS2P59051 145 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 DYRK1AQ13627 763 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 CDK10Q15131 360 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 ZNF429Q86V71 674 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 TEX45Q8NA69 505 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 BEST4Q8NFU0 473 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 SNAPC3Q92966 411 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 YIPF6Q96EC8 236 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 TINAGL1Q9GZM7 467 aaPredicted RBP10.02□□□□□ -0.81
LIG1-212ENST00000596549 ZNF430Q9H8G1 570 aaPredicted RBP10.02□□□□□ -0.81
LIG1-212ENST00000596549 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
LIG1-212ENST00000596549 A0A0A6YYH2 397 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 A6NJ64 397 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 BRI3O95415 125 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 LY86O95711 162 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 FCER2P06734 321 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 SPNP16150 400 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 CD40LGP29965 261 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 HOGA1Q86XE5 327 aa10.01□□□□□ -0.81
LIG1-212ENST00000596549 VKORC1L1Q8N0U8 176 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms