RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CBX5P45973 191 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 KRTAP10-11P60412 298 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 LSM3P62310 102 aaKnown RBP10.14□□□□□ -0.79
USE1-207ENST00000596136 MSMO1Q15800 293 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 DEFB136Q30KP8 78 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 UBE2NLQ5JXB2 153 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 PYHIN1Q6K0P9 492 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 OVCH2Q7RTZ1 564 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 GVQW1Q8N7I0 195 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 OR5M8Q8NGP6 311 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 OSR1Q8TAX0 266 aaPredicted RBP10.14□□□□□ -0.79
USE1-207ENST00000596136 S100A16Q96FQ6 103 aaKnown RBP10.14□□□□□ -0.79
USE1-207ENST00000596136 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 CLCC1Q96S66 551 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
USE1-207ENST00000596136 RBMX2Q9Y388 322 aaKnown RBP10.14□□□□□ -0.79
USE1-207ENST00000596136 A0A1W2PN81 502 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 SHOXO15266 292 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 BRI3O95415 125 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 CHRNA7P36544 502 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 UBE2KP61086 200 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 PJVKQ0ZLH3 352 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 CBX3Q13185 183 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 FXYD3Q14802 87 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 ACTBL2Q562R1 376 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 LFNGQ8NES3 379 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 ARPC1AQ92747 370 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 SNAPC3Q92966 411 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 CMTM3Q96MX0 182 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 FAM103A1Q9BTL3 118 aaKnown RBP10.13□□□□□ -0.79
USE1-207ENST00000596136 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
USE1-207ENST00000596136 PTHLHP12272 177 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 NCS1P62166 190 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 RPL30P62888 115 aaKnown RBP10.12□□□□□ -0.79
USE1-207ENST00000596136 ASPHD1Q5U4P2 390 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 UNQ5815/PRO19632Q6UWF5 114 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 SAMD12Q8N8I0 201 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 ABHD5Q8WTS1 349 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 GIMAP1Q8WWP7 306 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 TMEM68Q96MH6 324 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 HSD17B10Q99714 261 aaKnown RBP10.12□□□□□ -0.79
USE1-207ENST00000596136 SLA2Q9H6Q3 261 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 PRELID3BQ9Y3B1 194 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 A3GALT2U3KPV4 340 aa10.12□□□□□ -0.79
USE1-207ENST00000596136 H3BUA1 57 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 J3QRK9 145 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 CRYZL1O95825 349 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 NAT1P18440 290 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 FCGR2CP31995 323 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 BRWD1-AS2P59051 145 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 ARPC4P59998 168 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 VBP1P61758 197 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 GNB1P62873 340 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 ZNF616Q08AN1 781 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 PRSS8Q16651 343 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 VMA21Q3ZAQ7 101 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 KCTD9Q7L273 389 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 ANKRD13BQ86YJ7 626 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 OR5AP2Q8NGF4 316 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 OR1N2Q8NGR9 330 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 MRAPQ8TCY5 172 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 RHOVQ96L33 236 aa10.11□□□□□ -0.79
USE1-207ENST00000596136 K7EIL1 84 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 CNIH1O95406 144 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 PPYP01298 95 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 APOA1P02647 267 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
USE1-207ENST00000596136 OR8U8P0C7N1 319 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 AADACP22760 399 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
USE1-207ENST00000596136 TAS2R20P59543 309 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 CTF1Q16619 201 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 DHRS11Q6UWP2 260 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 ZNF66Q6ZN08 573 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 MFSD4AQ8N468 514 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 ZBTB34Q8NCN2 500 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 GRPEL2Q8TAA5 225 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 ACOT12Q8WYK0 555 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 DPF1Q92782 380 aa10.1□□□□□ -0.79
USE1-207ENST00000596136 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
USE1-207ENST00000596136 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 FCGR3BO75015 233 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 GABARAPO95166 117 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
USE1-207ENST00000596136 CD40LGP29965 261 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 RAB25P57735 213 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 CDK10Q15131 360 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 TMEM69Q5SWH9 247 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 C9orf66Q5T8R8 295 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 POC5Q8NA72 575 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 CASTOR1Q8WTX7 329 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 SCOCQ9UIL1 159 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 MRPS7Q9Y2R9 242 aaKnown RBP10.09□□□□□ -0.79
USE1-207ENST00000596136 SORL1Q92673 2214 aa10.09□□□□□ -0.79
USE1-207ENST00000596136 RAMP3O60896 148 aa10.08□□□□□ -0.8
USE1-207ENST00000596136 SAA1P0DJI8 122 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms