RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 OR2B11Q5JQS5 317 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 HCP5Q6MZN7 132 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 TGIF2LXQ8IUE1 241 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 PDZD9Q8IXQ8 264 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 MAPK1IP1LQ8NDC0 245 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 IL22RA2Q969J5 263 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 ST6GALNAC6Q969X2 333 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 RPEQ96AT9 228 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 NEURL2Q9BR09 285 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 PDCD10Q9BUL8 212 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 CHIAQ9BZP6 476 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF436Q9C0F3 470 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 C7orf69Q9H7B7 122 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 FAM212BQ9NTI7 297 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 HIF1ANQ9NWT6 349 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 DPM3Q9P2X0 92 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 TGP01266 2768 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 DUXBA0A1W2PPF3 345 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 CCSO14618 274 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 ADAP1O75689 374 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 RRASP10301 218 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 REG1BP48304 166 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 UBE2E1P51965 193 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF137PP52743 207 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 TAGLNQ01995 201 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF816Q0VGE8 651 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF585BQ52M93 769 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 GGNBP1Q5YKI7 109 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 CYB5R2Q6BCY4 276 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 LYZL2Q7Z4W2 148 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 OR4P4Q8NGL7 312 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 RBPMSQ93062 196 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 SEC22AQ96IW7 307 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 SLC35D1Q9NTN3 355 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 TMED3Q9Y3Q3 217 aa10.59□□□□□ -0.71
SHKBP1-209ENST00000595803 ODF3BA8MYP8 253 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 HPRT1P00492 218 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 APOA2P02652 100 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 IGHV4-31P0DP07 118 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 MC5RP33032 325 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 RTL8BQ17RB0 113 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 TPTE2P1Q5T6R2 138 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 MOB3BQ86TA1 216 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 SLC35G3Q8N808 338 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 OR5M8Q8NGP6 311 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 RNASE11Q8TAA1 199 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 LHFPL5Q8TAF8 219 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 DDB2Q92466 427 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 C2orf50Q96LR7 162 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 MRPL20Q9BYC9 149 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 RANGRFQ9HD47 186 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
SHKBP1-209ENST00000595803 LY6LH3BQJ8 138 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 H7C2Y5 167 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 J3QLI3 93 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 RBFOX2O43251 390 aaKnown RBP eCLIP10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 TXNL1O43396 289 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 RAMP3O60896 148 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 VDAC1P21796 283 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 BRWD1-AS2P59051 145 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 CYCSP99999 105 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 OR4S2Q8NH73 311 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 ASB13Q8WXK3 278 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 PPP1R14BQ96C90 147 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 RRNAD1Q96FB5 475 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 PLEKHA2Q9HB19 425 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 GSKIPQ9P0R6 139 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 TBL2Q9Y4P3 447 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 SVEP1Q4LDE5 3571 aa10.57□□□□□ -0.72
SHKBP1-209ENST00000595803 CENPVL3A0A0U1RRI6 287 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 OOSP1A8MZH6 123 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 OR2A4O95047 310 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 S1PR2O95136 353 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 AKR1C2P52895 323 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 RAP2BP61225 183 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 ERVK-16P61578 105 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 IAH1Q2TAA2 248 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 MIDNQ504T8 468 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 THOC7Q6I9Y2 204 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 OR5AN1Q8NGI8 311 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 LSM10Q969L4 123 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 MALSU1Q96EH3 234 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 OR10C1Q96KK4 312 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 FYTTD1Q96QD9 318 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 OR2A7Q96R45 310 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 SPIN2AQ99865 258 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 SPIN2BQ9BPZ2 258 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 AIFM2Q9BRQ8 373 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 COMMD9Q9P000 198 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 HILPDAQ9Y5L2 63 aa10.56□□□□□ -0.72
SHKBP1-209ENST00000595803 IGHV1-69DA0A0B4J2H0 117 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 238.2 ms