RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SLC22A5O76082 557 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 TPPPO94811 219 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 CD3DP04234 171 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 BRWD1-AS2P59051 145 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 TMEM177Q53S58 311 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 PYHIN1Q6K0P9 492 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 LCNL1Q6ZST4 164 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 MFSD4AQ8N468 514 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 OR4D10Q8NGI6 311 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 OR6F1Q8NGZ6 308 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 CHPT1Q8WUD6 406 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 HSD17B10Q99714 261 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 RNF5Q99942 180 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 OR51J1Q9H342 316 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 WSB1Q9Y6I7 421 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 TNCP24821 2201 aa10.84□□□□□ -0.67
SHKBP1-207ENST00000595631 G3V318 75 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 M0QZ24 198 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 SPDEFO95238 335 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 CA2P00918 260 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 CRYGBP07316 175 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 RRASP10301 218 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 GNRHRP30968 328 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 TSPAN5P62079 268 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 CX3CL1P78423 397 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 CD83Q01151 205 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 CBX3Q13185 183 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 KHDC1LQ5JSQ8 128 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 PRR31Q5SQ13 230 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 IDO2Q6ZQW0 420 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 OR4X2Q8NGF9 303 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 C15orf40Q8WUR7 153 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 SMIM4Q8WVI0 70 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 SOSTQ9BQB4 213 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 FAM103A1Q9BTL3 118 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
SHKBP1-207ENST00000595631 TCRBV4S1A1TA0A5B7 111 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 FABP12A6NFH5 140 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 ARPC1BO15143 372 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 CTDSPLO15194 276 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 RAMP3O60896 148 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 CSF1P09603 554 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 SSBP2P81877 361 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 CFHR3Q02985 330 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 MSMO1Q15800 293 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 ECSCRQ19T08 205 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 C2orf68Q2NKX9 166 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 ACTBL2Q562R1 376 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 RNASE10Q5GAN6 216 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 VAX1Q5SQQ9 334 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 FAAP20Q6NZ36 180 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 ZNF66Q6ZN08 573 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 C18orf65Q6ZTR6 163 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 TMEM229BQ8NBD8 167 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 OR51H1Q8NH63 302 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 ABHD5Q8WTS1 349 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 MMP27Q9H306 513 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 A3GALT2U3KPV4 340 aa10.82□□□□□ -0.68
SHKBP1-207ENST00000595631 RLN1P04808 185 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 IGF1P05019 195 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 SAA1P0DJI8 122 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 EGR2P11161 476 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 VDAC1P21796 283 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 LGALS7P47929 136 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 GNB1P62873 340 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 SLC35B1P78383 322 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 MRPS10P82664 201 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 PHLDA2Q53GA4 152 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 AADACL3Q5VUY0 350 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 TREML4Q6UXN2 200 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 ZBTB34Q8NCN2 500 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 DGCR14Q96DF8 476 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 PRELID3BQ9Y3B1 194 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 V9GYH0 126 aa10.81□□□□□ -0.68
SHKBP1-207ENST00000595631 TRAV41A0A0B4J266 112 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 RAB3DO95716 219 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 CD74P04233 296 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 RPLP1P05386 114 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 S100A5P33763 92 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 TAS2R19P59542 299 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 UBE2KP61086 200 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 ZNF79Q15937 498 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 STEAP1BQ6NZ63 245 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 PPP1R27Q86WC6 154 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 SPAG16Q8N0X2 631 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 OR4S2Q8NH73 311 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 GRPEL2Q8TAA5 225 aa10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 OSR1Q8TAX0 266 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-207ENST00000595631 GPR31O00270 319 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 GSTZ1O43708 216 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 PGLYRP1O75594 196 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 IFNA6P05013 189 aa10.79□□□□□ -0.68
SHKBP1-207ENST00000595631 ZNF735P0CB33 412 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms