RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ECSCRQ19T08 205 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 CXorf66Q5JRM2 361 aaPredicted RBP8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF562Q6V9R5 426 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 OVCH2Q7RTZ1 564 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF695Q8IW36 515 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 OR5AP2Q8NGF4 316 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 ACOT12Q8WYK0 555 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 RAX2Q96IS3 184 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 ADTRPQ96IZ2 230 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 HARBI1Q96MB7 349 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 CMTM3Q96MX0 182 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 DUX3Q96PT4 197 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 GPHA2Q96T91 129 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 P2RX4Q99571 388 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 NECAP2Q9NVZ3 263 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 NUBP2Q9Y5Y2 271 aa8.57□□□□□ -1.04
SHKBP1-206ENST00000595523 CRYZL1O95825 349 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 PPYP01298 95 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 RRASP10301 218 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 IGLL1P15814 213 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 CDX1P47902 265 aaPredicted RBP8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 CDK10Q15131 360 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 DEFB136Q30KP8 78 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 OR2B11Q5JQS5 317 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 KCTD9Q7L273 389 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 PPP1R27Q86WC6 154 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 GPX8Q8TED1 209 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 IFT46Q9NQC8 304 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 CCL28Q9NRJ3 127 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 A3GALT2U3KPV4 340 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 COL7A1Q02388 2944 aa8.56□□□□□ -1.04
SHKBP1-206ENST00000595523 A0A1W2PN81 502 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 NUDT19A8MXV4 375 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 SHOXO15266 292 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 SLC22A5O76082 557 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF182P17025 639 aaPredicted RBP8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 CD33P20138 364 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 SLC6A1P30531 599 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 PRSS3P35030 304 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 CHRNA7P36544 502 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 RFX2P48378 723 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 IDO2Q6ZQW0 420 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 SNX29P2Q8IUI4 249 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 CLVS1Q8IUQ0 354 aaPredicted RBP8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF491Q8N8L2 437 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 CASTOR1Q8WTX7 329 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 SECTM1Q8WVN6 248 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 ARPC1AQ92747 370 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 HSD17B10Q99714 261 aaKnown RBP8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 MIXL1Q9H2W2 232 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 GNB4Q9HAV0 340 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 TAS2R8Q9NYW2 309 aa8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 MRPS7Q9Y2R9 242 aaKnown RBP8.55□□□□□ -1.04
SHKBP1-206ENST00000595523 I3L521 148 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 CCL24O00175 119 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 TNFSF12O43508 249 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 FCGR3BO75015 233 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 PMP2P02689 132 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 PRB2P02812 416 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 SAA1P0DJI8 122 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 MYCNOSP40205 109 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 RPL5P46777 297 aaKnown RBP8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 RAB9AP51151 201 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 FXYD4P59646 89 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 UBE2KP61086 200 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 GNB1P62873 340 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 CBX3Q13185 183 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 DYRK1AQ13627 763 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 FXYD3Q14802 87 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 MSMO1Q15800 293 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 PDLIM3Q53GG5 364 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 AKIRIN2Q53H80 203 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 DHRS11Q6UWP2 260 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 ZNF818PQ6ZRF7 136 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 MFSD4AQ8N468 514 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 TCTEX1D1Q8N7M0 179 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 GRPEL2Q8TAA5 225 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 OSR1Q8TAX0 266 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 ABHD5Q8WTS1 349 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 C4orf3Q8WVX3 66 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 AP3S1Q92572 193 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 UBE2E2Q96LR5 201 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 EHFQ9NZC4 300 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 SORL1Q92673 2214 aa8.54□□□□□ -1.04
SHKBP1-206ENST00000595523 SMIM31A0A1B0GVY4 71 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 RAMP3O60896 148 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 HLA-DMAP28067 261 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 GNRHRP30968 328 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 HRH1P35367 487 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 TMBIM6P55061 237 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 FHL3Q13643 280 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 PRSS8Q16651 343 aa8.53□□□□□ -1.04
SHKBP1-206ENST00000595523 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms