RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SHOXO15266 292 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 IGF1P05019 195 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 KIR2DS2P43631 304 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 DGCR2P98153 550 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 RNASE12Q5GAN4 147 aaKnown RBP20.34■□□□□ 0.85
TRIM28-204ENST00000594806 RNASE10Q5GAN6 216 aaKnown RBP20.34■□□□□ 0.85
TRIM28-204ENST00000594806 COMMD1Q8N668 190 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 OR4X2Q8NGF9 303 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 HARBI1Q96MB7 349 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 FBXL15Q9H469 300 aa20.34■□□□□ 0.85
TRIM28-204ENST00000594806 METTL1Q9UBP6 276 aaKnown RBP20.34■□□□□ 0.85
TRIM28-204ENST00000594806 GSTZ1O43708 216 aaPredicted RBP20.33■□□□□ 0.85
TRIM28-204ENST00000594806 IFNA6P05013 189 aa20.33■□□□□ 0.85
TRIM28-204ENST00000594806 CATR1Q13166 79 aa20.33■□□□□ 0.85
TRIM28-204ENST00000594806 ARRDC1Q8N5I2 433 aa20.33■□□□□ 0.85
TRIM28-204ENST00000594806 TCTEX1D2Q8WW35 142 aa20.33■□□□□ 0.85
TRIM28-204ENST00000594806 HSPB9Q9BQS6 159 aa20.33■□□□□ 0.85
TRIM28-204ENST00000594806 OR51J1Q9H342 316 aa20.33■□□□□ 0.85
TRIM28-204ENST00000594806 LINC01548A6NM66 108 aa20.32■□□□□ 0.84
TRIM28-204ENST00000594806 FCGR3BO75015 233 aa20.32■□□□□ 0.84
TRIM28-204ENST00000594806 CRYZL1O95825 349 aa20.32■□□□□ 0.84
TRIM28-204ENST00000594806 CD74P04233 296 aa20.32■□□□□ 0.84
TRIM28-204ENST00000594806 PTBP1P26599 531 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRIM28-204ENST00000594806 GNRHRP30968 328 aa20.32■□□□□ 0.84
TRIM28-204ENST00000594806 OR4S2Q8NH73 311 aa20.32■□□□□ 0.84
TRIM28-204ENST00000594806 IGHV7-81A0A0B4J1V7 117 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 PLXNB1O43157 2135 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 IGLV2-23P01705 113 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 CSF1P09603 554 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 CD28P10747 220 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 UCP3P55916 312 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 RPL30P62888 115 aaKnown RBP20.31■□□□□ 0.84
TRIM28-204ENST00000594806 C2orf68Q2NKX9 166 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 PRR31Q5SQ13 230 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 ZNF818PQ6ZRF7 136 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 CMTM1Q8IZ96 169 aa20.31■□□□□ 0.84
TRIM28-204ENST00000594806 NOL4LQ96MY1 436 aaPredicted RBP20.31■□□□□ 0.84
TRIM28-204ENST00000594806 SLC25A17O43808 307 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 OPN1MWP04001 364 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 CD3DP04234 171 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 OPN1MW2P0DN77 364 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 OPN1MW3P0DN78 364 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 S100GP29377 79 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 CD83Q01151 205 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 VMA21Q3ZAQ7 101 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 ZNF562Q6V9R5 426 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 PPP1R27Q86WC6 154 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 NDUFA11Q86Y39 141 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 C11orf44Q8N8P7 122 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 TEX45Q8NA69 505 aa20.3■□□□□ 0.84
TRIM28-204ENST00000594806 M0QYG6 137 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 GPR31O00270 319 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 RBFOX2O43251 390 aaKnown RBP eCLIP20.29■□□□□ 0.84
TRIM28-204ENST00000594806 CRYGBP07316 175 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 VDAC1P21796 283 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 UBE2KP61086 200 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 MEF2DQ14814 521 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 STEAP1BQ6NZ63 245 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 CD300LFQ8TDQ1 290 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 AIFM2Q9BRQ8 373 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 FXYD6Q9H0Q3 95 aa20.29■□□□□ 0.84
TRIM28-204ENST00000594806 SRRM4A7MD48 611 aaKnown RBP20.28■□□□□ 0.84
TRIM28-204ENST00000594806 RAB3DO95716 219 aa20.28■□□□□ 0.84
TRIM28-204ENST00000594806 CRIP2P52943 208 aaPredicted RBP20.28■□□□□ 0.84
TRIM28-204ENST00000594806 CX3CL1P78423 397 aa20.28■□□□□ 0.84
TRIM28-204ENST00000594806 TEX38Q6PEX7 206 aa20.28■□□□□ 0.84
TRIM28-204ENST00000594806 CCDC190Q86UF4 302 aa20.28■□□□□ 0.84
TRIM28-204ENST00000594806 POC5Q8NA72 575 aa20.28■□□□□ 0.84
TRIM28-204ENST00000594806 CITED2Q99967 270 aaPredicted RBP20.28■□□□□ 0.84
TRIM28-204ENST00000594806 TINAGL1Q9GZM7 467 aaPredicted RBP20.28■□□□□ 0.84
TRIM28-204ENST00000594806 LINC00527Q9UJ94 153 aa20.28■□□□□ 0.84
TRIM28-204ENST00000594806 TNFSF12O43508 249 aa20.27■□□□□ 0.84
TRIM28-204ENST00000594806 CREBL2O60519 120 aaPredicted RBP20.27■□□□□ 0.84
TRIM28-204ENST00000594806 ETV6P41212 452 aa20.27■□□□□ 0.84
TRIM28-204ENST00000594806 SPANXN2Q5MJ10 180 aa20.27■□□□□ 0.84
TRIM28-204ENST00000594806 SLC38A6Q8IZM9 456 aa20.27■□□□□ 0.84
TRIM28-204ENST00000594806 TCTEX1D1Q8N7M0 179 aa20.27■□□□□ 0.84
TRIM28-204ENST00000594806 RSRP1Q9BUV0 290 aa20.27■□□□□ 0.84
TRIM28-204ENST00000594806 TSSC4Q9Y5U2 329 aaPredicted RBP20.27■□□□□ 0.84
TRIM28-204ENST00000594806 TCRBV4S1A1TA0A5B7 111 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 FCN1O00602 326 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 ATP6V0E1O15342 81 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 HRASP01112 189 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 TMEM267Q0VDI3 215 aaPredicted RBP20.26■□□□□ 0.83
TRIM28-204ENST00000594806 AADACL3Q5VUY0 350 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 FOXB2Q5VYV0 432 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 ZNF329Q86UD4 541 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 LHFPL1Q86WI0 220 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 VSTM2AQ8TAG5 236 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 PARP11Q9NR21 331 aa20.26■□□□□ 0.83
TRIM28-204ENST00000594806 PGLYRP1O75594 196 aaPredicted RBP20.25■□□□□ 0.83
TRIM28-204ENST00000594806 CA2P00918 260 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 ELANEP08246 267 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 AKAIN1P0CW23 69 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 BRWD1-AS2P59051 145 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 CFHR3Q02985 330 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 OR2B11Q5JQS5 317 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 TCTEX1D4Q5JR98 221 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 SPAG16Q8N0X2 631 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 OR6Q1Q8NGQ2 317 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms