RNA–Protein interactions for RNA: ENST00000593549.5

SOX2-OT-220, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 756 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-220ENST00000593549 NDUFA11Q86Y39 141 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 OR4X2Q8NGF9 303 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 C15orf40Q8WUR7 153 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 TCTEX1D2Q8WW35 142 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 MOB3AQ96BX8 217 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 CLCC1Q96S66 551 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 HSD17B10Q99714 261 aaKnown RBP10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 FXYD6Q9H0Q3 95 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 PARP11Q9NR21 331 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 MTFP1Q9UDX5 166 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 ZNF580Q9UK33 172 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 FBXO7Q9Y3I1 522 aa10.67□□□□□ -0.7
SOX2-OT-220ENST00000593549 A0A1W2PRX2 142 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 M0QYG6 137 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 SHOXO15266 292 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 FCGR3BO75015 233 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 CRYGBP07316 175 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 CSF1P09603 554 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 GNRHRP30968 328 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 TNFSF8P32971 234 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 LGALS7P47929 136 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 SLC35B1P78383 322 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 CX3CL1P78423 397 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 VAX1Q5SQQ9 334 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 ZNF66Q6ZN08 573 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 MFSD4AQ8N468 514 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 FCAMRQ8WWV6 532 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 PRELID3BQ9Y3B1 194 aa10.66□□□□□ -0.7
SOX2-OT-220ENST00000593549 TCRBV4S1A1TA0A5B7 111 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 G3V318 75 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 CA2P00918 260 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 CD3DP04234 171 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 VDAC1P21796 283 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 PJVKQ0ZLH3 352 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 IL18Q14116 193 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 ACTBL2Q562R1 376 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 ZBTB34Q8NCN2 500 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 OR6F1Q8NGZ6 308 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 FAM110DQ8TAY7 271 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 SMIM4Q8WVI0 70 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 SOSTQ9BQB4 213 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 TINAGL1Q9GZM7 467 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 MMP27Q9H306 513 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 WSB1Q9Y6I7 421 aa10.65□□□□□ -0.7
SOX2-OT-220ENST00000593549 FBN3Q75N90 2809 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 ARPC1BO15143 372 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 CTDSPLO15194 276 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 IGHG4P01861 327 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 OPN1MWP04001 364 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 OPN1MW2P0DN77 364 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 OPN1MW3P0DN78 364 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 EGR2P11161 476 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 PPIFP30405 207 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 UBE2KP61086 200 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 TSPAN5P62079 268 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 MRPS10P82664 201 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 MRGPRG-AS1Q2M3A8 158 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 C19orf54Q5BKX5 351 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 AADACL3Q5VUY0 350 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 TEX38Q6PEX7 206 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 ZNF562Q6V9R5 426 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 IDO2Q6ZQW0 420 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 PPP1R27Q86WC6 154 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 COMMD1Q8N668 190 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 OR4D10Q8NGI6 311 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 OR4S2Q8NH73 311 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 GON7Q9BXV9 100 aa10.64□□□□□ -0.71
SOX2-OT-220ENST00000593549 TRAV41A0A0B4J266 112 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 DPPA5A6NC42 116 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 RAMP3O60896 148 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 CD74P04233 296 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 RPLP1P05386 114 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 TBPP20226 339 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 SSBP1Q04837 148 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 FOXE3Q13461 319 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 VMA21Q3ZAQ7 101 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 RNASE10Q5GAN6 216 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 C18orf65Q6ZTR6 163 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 TMEM229BQ8NBD8 167 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 MINDY2Q8NBR6 621 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 OR51H1Q8NH63 302 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 RABL2BQ9UNT1 228 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 A3GALT2U3KPV4 340 aa10.63□□□□□ -0.71
SOX2-OT-220ENST00000593549 FABP12A6NFH5 140 aa10.62□□□□□ -0.71
SOX2-OT-220ENST00000593549 GSTZ1O43708 216 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms