RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SERPINB10P48595 397 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 IRF3Q14653 427 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
LIG1-205ENST00000593425 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
LIG1-205ENST00000593425 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
LIG1-205ENST00000593425 OR56B1Q8NGI3 324 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 UFD1Q92890 307 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 FAM3DQ96BQ1 224 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 USMG5Q96IX5 58 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 PHB2Q99623 299 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 CEPT1Q9Y6K0 416 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 TNCP24821 2201 aa12.39□□□□□ -0.43
LIG1-205ENST00000593425 TRBV6-7A0A0A0MS04 114 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 PRH1P02810 166 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 FCGR3AP08637 254 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 ZNF45Q02386 682 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 TNXAQ16473 311 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 TATDN3Q17R31 274 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 C2orf76Q3KRA6 126 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 IDO2Q6ZQW0 420 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 SRSF12Q8WXF0 261 aaKnown RBP12.38□□□□□ -0.43
LIG1-205ENST00000593425 MAFIPQ8WZ33 124 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 DDB2Q92466 427 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
LIG1-205ENST00000593425 ZNF230Q9UIE0 474 aaPredicted RBP12.38□□□□□ -0.43
LIG1-205ENST00000593425 TMEM272A0A1B0GTI8 110 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 BMPR1BO00238 502 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
LIG1-205ENST00000593425 DENRO43583 198 aaKnown RBP12.37□□□□□ -0.43
LIG1-205ENST00000593425 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 EDN2P20800 178 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 CD81P60033 236 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 CBX3Q13185 183 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 EXOSC2Q13868 293 aaKnown RBP12.37□□□□□ -0.43
LIG1-205ENST00000593425 PRSS8Q16651 343 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 SNAPC3Q92966 411 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 WFDC10AQ9H1F0 79 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
LIG1-205ENST00000593425 A0A0B4J203 849 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 LINC00473A8K010 186 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 JTBO76095 146 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 CRYZL1O95825 349 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 CD7P09564 240 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 HSMCR30P0CW71 290 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 CALRP27797 417 aaKnown RBP12.36□□□□□ -0.43
LIG1-205ENST00000593425 DUTP33316 252 aaKnown RBP12.36□□□□□ -0.43
LIG1-205ENST00000593425 UBE2KP61086 200 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 RHOGP84095 191 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 TAGLNQ01995 201 aaKnown RBP12.36□□□□□ -0.43
LIG1-205ENST00000593425 TPBGQ13641 420 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 VMA21Q3ZAQ7 101 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 CD300EQ496F6 205 aaPredicted RBP12.36□□□□□ -0.43
LIG1-205ENST00000593425 HES5Q5TA89 166 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 TEX45Q8NA69 505 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 OR2K2Q8NGT1 345 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 ACOT12Q8WYK0 555 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 NEURL2Q9BR09 285 aa12.36□□□□□ -0.43
LIG1-205ENST00000593425 TRBV9A0A0B4J1U6 114 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 RBMY1BA6NDE4 496 aaKnown RBP12.35□□□□□ -0.43
LIG1-205ENST00000593425 RBMY1EA6NEQ0 496 aaKnown RBP12.35□□□□□ -0.43
LIG1-205ENST00000593425 ZNF785A8K8V0 405 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 MFNGO00587 321 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 MPPED1O15442 326 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 ARL6IP5O75915 188 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 RBMY1DP0C7P1 496 aaKnown RBP12.35□□□□□ -0.43
LIG1-205ENST00000593425 RRASP10301 218 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 MRPS15P82914 257 aaKnown RBP12.35□□□□□ -0.43
LIG1-205ENST00000593425 DEFB125Q8N687 156 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 SCN3BQ9NY72 215 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 RBM7Q9Y580 266 aaKnown RBP12.35□□□□□ -0.43
LIG1-205ENST00000593425 V9GY05 133 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 ALMS1Q8TCU4 4167 aa12.35□□□□□ -0.43
LIG1-205ENST00000593425 A0A075B6Q4 140 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 AIREO43918 545 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 TPPPO94811 219 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 DIRAS3O95661 229 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 SAA1P0DJI8 122 aaPredicted RBP12.34□□□□□ -0.43
LIG1-205ENST00000593425 GNB3P16520 340 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 FABP5Q01469 135 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 TRAM1Q15629 374 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 C10orf55Q5SWW7 151 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 LAX1Q8IWV1 398 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 ZNF430Q9H8G1 570 aaPredicted RBP12.34□□□□□ -0.43
LIG1-205ENST00000593425 RAB22AQ9UL26 194 aa12.34□□□□□ -0.43
LIG1-205ENST00000593425 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.33□□□□□ -0.44
LIG1-205ENST00000593425 PPP5D1E7EU14 171 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 MLLT11Q13015 90 aaPredicted RBP12.33□□□□□ -0.44
LIG1-205ENST00000593425 H1FOOQ8IZA3 346 aaPredicted RBP12.33□□□□□ -0.44
LIG1-205ENST00000593425 OR10R2Q8NGX6 335 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 DYNLRB2Q8TF09 96 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms