RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 SIRT7Q9NRC8 400 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 SVILO95425 2214 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 USF3Q68DE3 2245 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 ITGB1BP1O14713 200 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 CD40P25942 277 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 RPS16P62249 146 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 SNRPEP62304 92 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 PMS2P11Q13670 270 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 HNF4GQ14541 408 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 AARDQ4LEZ3 155 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 FAM201AQ5SY85 155 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 ADAM5Q6NVV9 412 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 RBMS3Q6XE24 437 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 RPP25LQ8N5L8 163 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 CA5BP1Q8WTZ4 195 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 S1PR3Q99500 378 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 FAM234AQ9H0X4 552 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 CACNA1DQ01668 2161 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 CTXND1A0A1B0GTU2 59 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 B4DEV8 164 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 MKRN2OSH3BPM6 223 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 IGHV1-46P01743 117 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 RPP30P78346 268 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 TFF3Q07654 80 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 PNRC1Q12796 327 aaPredicted RBP13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 FFAR4Q5NUL3 377 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 HEPN1Q6WQI6 88 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 SSX9Q7RTT3 188 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 SDSLQ96GA7 329 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 NPCDR1Q9BY65 106 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 GCM1Q9NP62 436 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 DIDO1Q9BTC0 2240 aaKnown RBP13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 CXorf65A6NEN9 183 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 C15orf62A8K5M9 175 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 C17orf112F2Z3M2 114 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 IGHV3-7P01780 117 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 CGB3P0DN86 165 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 CGB7P0DN87 165 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 SELLP14151 372 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 ZNF134P52741 427 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 SPCS3P61009 180 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 C17orf58Q2M2W7 97 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 STUMQ69YW2 141 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 OR10G9Q8NGN4 311 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 OR10G7Q8NGN6 311 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 GFOD1Q9NXC2 390 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 GAB2Q9UQC2 676 aa13.72□□□□□ -0.21
PRKCSH-217ENST00000592741 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 C5orf52A6NGY3 159 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 NQO2P16083 231 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 NBL1P41271 181 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 NUP37Q8NFH4 326 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 OR52E5Q8NH55 327 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 ACTR3CQ9C0K3 210 aaPredicted RBP13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 SLC25A22Q9H936 323 aa13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 SPENQ96T58 3664 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-217ENST00000592741 ZFHX4Q86UP3 3567 aa13.71□□□□□ -0.22
PRKCSH-217ENST00000592741 CNOT1A5YKK6 2376 aaKnown RBP13.71□□□□□ -0.22
PRKCSH-217ENST00000592741 KBTBD11-OT1A0A1B0GTJ5 212 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 ZNF98A6NK75 572 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 SLC31A2O15432 143 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 C1QL4Q86Z23 238 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 OR4S2Q8NH73 311 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 Q8TCH9 128 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 PRRG2O14669 202 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 ATXN7O15265 892 aaPredicted RBP13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 GAFA1Q96PS6 74 aa13.7□□□□□ -0.22
PRKCSH-217ENST00000592741 UBE2CO00762 179 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 EIF3GO75821 320 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 IRF2P14316 349 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 MDKP21741 143 aaPredicted RBP13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 CCKARP32238 428 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 TMEM108Q6UXF1 575 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 C22orf34Q6ZV56 151 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 DDB2Q92466 427 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 TMEM140Q9NV12 185 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 IFNA10P01566 189 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 PSMB3P49720 205 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 ELOBQ15370 118 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 PDLIM3Q53GG5 364 aaPredicted RBP13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 DEFB108BQ8NET1 73 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 LEAP2Q969E1 77 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 C12orf57Q99622 126 aa13.69□□□□□ -0.22
PRKCSH-217ENST00000592741 DMXL1Q9Y485 3027 aa13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 A0A1W2PPE3 182 aa13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 RPS10P46783 165 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 THBS3P49746 956 aa13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 RELBQ01201 579 aa13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 MEF2BQ02080 365 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 ACOT6Q3I5F7 207 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 CT45A1Q5HYN5 189 aa13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 DUX4L9Q6RFH8 374 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-217ENST00000592741 CT45A3Q8NHU0 189 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms