RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 NECAP2Q9NVZ3 263 aa12.27□□□□□ -0.45
LIG3-215ENST00000592690 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.45
LIG3-215ENST00000592690 A0A1W2PN81 502 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 ARPC1BO15143 372 aaKnown RBP12.26□□□□□ -0.45
LIG3-215ENST00000592690 SOX15O60248 233 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 PPYP01298 95 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 RRASP10301 218 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 IGLL1P15814 213 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 CHRNA7P36544 502 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 LGALS7P47929 136 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 PJVKQ0ZLH3 352 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 CBX3Q13185 183 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 EIF4EBP1Q13541 118 aaPredicted RBP12.26□□□□□ -0.45
LIG3-215ENST00000592690 OR2B11Q5JQS5 317 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 KCTD9Q7L273 389 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
LIG3-215ENST00000592690 MINDY2Q8NBR6 621 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 SECTM1Q8WVN6 248 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 GPHA2Q96T91 129 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 CCL28Q9NRJ3 127 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 NUBP2Q9Y5Y2 271 aa12.26□□□□□ -0.45
LIG3-215ENST00000592690 FCGR3BO75015 233 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 SLC22A5O76082 557 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 ZNF182P17025 639 aaPredicted RBP12.25□□□□□ -0.45
LIG3-215ENST00000592690 SLC6A1P30531 599 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 PRSS3P35030 304 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 CDX1P47902 265 aaPredicted RBP12.25□□□□□ -0.45
LIG3-215ENST00000592690 KIAA0141Q14154 515 aaPredicted RBP12.25□□□□□ -0.45
LIG3-215ENST00000592690 SPCS2Q15005 226 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 CDK10Q15131 360 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 MRGPRG-AS1Q2M3A8 158 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 KPRPQ5T749 579 aaPredicted RBP12.25□□□□□ -0.45
LIG3-215ENST00000592690 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 OVCH2Q7RTZ1 564 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 CLVS1Q8IUQ0 354 aaPredicted RBP12.25□□□□□ -0.45
LIG3-215ENST00000592690 CASTOR1Q8WTX7 329 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 ARPC1AQ92747 370 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 RAX2Q96IS3 184 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 P2RX4Q99571 388 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 TAS2R8Q9NYW2 309 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 EHFQ9NZC4 300 aa12.25□□□□□ -0.45
LIG3-215ENST00000592690 MRPS7Q9Y2R9 242 aaKnown RBP12.25□□□□□ -0.45
LIG3-215ENST00000592690 NAT1P18440 290 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 MYCNOSP40205 109 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 FXYD4P59646 89 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 GNB1P62873 340 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 FXYD3Q14802 87 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 MZT2AQ6P582 158 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 UNQ5815/PRO19632Q6UWF5 114 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 SNX29P2Q8IUI4 249 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 GRPEL2Q8TAA5 225 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 GPX8Q8TED1 209 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 AP3S1Q92572 193 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 HSD17B10Q99714 261 aaKnown RBP12.24□□□□□ -0.45
LIG3-215ENST00000592690 GNB4Q9HAV0 340 aa12.24□□□□□ -0.45
LIG3-215ENST00000592690 FOXA2Q9Y261 457 aaPredicted RBP12.24□□□□□ -0.45
LIG3-215ENST00000592690 SMIM31A0A1B0GVY4 71 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 CCL24O00175 119 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 TNFSF12O43508 249 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 PMP2P02689 132 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 RFX2P48378 723 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 RAB9AP51151 201 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 BRWD1-AS2P59051 145 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 UBE2KP61086 200 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 TMEM267Q0VDI3 215 aaPredicted RBP12.23□□□□□ -0.45
LIG3-215ENST00000592690 VMA21Q3ZAQ7 101 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 PDLIM3Q53GG5 364 aaPredicted RBP12.23□□□□□ -0.45
LIG3-215ENST00000592690 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 IDO2Q6ZQW0 420 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 ZNF491Q8N8L2 437 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 OSR1Q8TAX0 266 aaPredicted RBP12.23□□□□□ -0.45
LIG3-215ENST00000592690 C4orf3Q8WVX3 66 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 TCTEX1D2Q8WW35 142 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 GIMAP1Q8WWP7 306 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 SLC5A7Q9GZV3 580 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 PRELID3BQ9Y3B1 194 aa12.23□□□□□ -0.45
LIG3-215ENST00000592690 CNIH1O95406 144 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 PRB2P02812 416 aaPredicted RBP12.22□□□□□ -0.45
LIG3-215ENST00000592690 SAA1P0DJI8 122 aaPredicted RBP12.22□□□□□ -0.45
LIG3-215ENST00000592690 TAS2R46P59540 309 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 DYRK1AQ13627 763 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 AKIRIN2Q53H80 203 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 ACTBL2Q562R1 376 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 ZNF66Q6ZN08 573 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 TMEM17Q86X19 198 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 LYSMD2Q8IV50 215 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 MFSD4AQ8N468 514 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 TCTEX1D1Q8N7M0 179 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 RAB2BQ8WUD1 216 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 RCC1LQ96I51 464 aaKnown RBP12.22□□□□□ -0.45
LIG3-215ENST00000592690 UBE2E2Q96LR5 201 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 DCUN1D5Q9BTE7 237 aa12.22□□□□□ -0.45
LIG3-215ENST00000592690 SCPEP1Q9HB40 452 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms