RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 EREGO14944 169 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 PDE6DO43924 150 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 WISP2O76076 250 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 HAND1O96004 215 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 IL3RAP26951 378 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 BMI1P35226 326 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 PRSS8Q16651 343 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 MCEMP1Q8IX19 187 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 TMEM251Q8N6I4 163 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 RAB1CQ92928 201 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
SMARCA4-219ENST00000592604 PSPNO60542 156 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 FOXL1Q12952 345 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 SLC35E4Q6ICL7 350 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 WDYHV1Q96HA8 205 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 HES4Q9HCC6 221 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 COL27A1Q8IZC6 1860 aaPredicted RBP12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 OOEPA6NGQ2 149 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 LINC00614P0C842 121 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 CHRNA7P36544 502 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 GNB1P62873 340 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 TBC1D28Q2M2D7 210 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 ABHD17BQ5VST6 288 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 R3HDM4Q96D70 268 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 GTF3C1Q12789 2109 aa12.43□□□□□ -0.42
SMARCA4-219ENST00000592604 CER1O95813 267 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 PAX5Q02548 391 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 Q5PR19 223 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 FAM78BQ5VT40 261 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 H2BFWTQ7Z2G1 175 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 MRPL41Q8IXM3 137 aaKnown RBP12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 WDR83OSQ9Y284 106 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 R4GN57 208 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 MPLP40238 635 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 OR1C1Q15619 314 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 FBXW9Q5XUX1 488 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 SLC24A4Q8NFF2 622 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 MAFAQ8NHW3 353 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 KCNIP2Q9NS61 270 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 LOXL2Q9Y4K0 774 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 PXMP4Q9Y6I8 212 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 CACNA1DQ01668 2161 aa12.42□□□□□ -0.42
SMARCA4-219ENST00000592604 HBZP02008 142 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 PPP1CBP62140 327 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 GABRA6Q16445 453 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 FAM53AQ6NSI3 398 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 TAAR6Q96RI8 345 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 OR2J1Q9GZK6 312 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 C15orf62A8K5M9 175 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 OR4A8P0C604 315 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 DEFA4P12838 97 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 RPS16P62249 146 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 WDR31Q8NA23 367 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 SPRY4Q9C004 299 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 A0A0U1RQK1 487 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 ZNF320A2RRD8 509 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 F6UZH7 168 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 CEBPDP49716 269 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 C3AR1Q16581 482 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 OR5T1Q8NG75 326 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
SMARCA4-219ENST00000592604 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 ALKBH6Q3KRA9 238 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 NDUFB4O95168 129 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 CD82P27701 267 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 MRPL49Q13405 166 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 NINJ1Q92982 152 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 ABI3Q9P2A4 366 aa12.4□□□□□ -0.42
SMARCA4-219ENST00000592604 CRYAAP02489 173 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 TDGF1P13385 188 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 CD1BP29016 333 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 ATP5G3P48201 142 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 PLGLB1Q02325 96 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 TRIP6Q15654 476 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 BTNL3Q6UXE8 466 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 RNASE8Q8TDE3 154 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 COQ2Q96H96 371 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 IL17BQ9UHF5 180 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 LINC00473A8K010 186 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 GRPP07492 148 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 CELA3BP08861 270 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 ACP1P24666 158 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 SOX8P57073 446 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 ERVFC1-1P60608 527 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 AESQ08117 197 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 C1orf194Q5T5A4 169 aa12.39□□□□□ -0.43
SMARCA4-219ENST00000592604 HLA-CQ95604 372 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms