RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 PPP1R27Q86WC6 154 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 TCTEX1D1Q8N7M0 179 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 MINDY2Q8NBR6 621 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 ABHD5Q8WTS1 349 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 MRPS7Q9Y2R9 242 aaKnown RBP11.35□□□□□ -0.59
DDX39A-217ENST00000592391 PRELID3BQ9Y3B1 194 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 NUBP2Q9Y5Y2 271 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 PLXNB1O43157 2135 aa11.35□□□□□ -0.59
DDX39A-217ENST00000592391 SRRM4A7MD48 611 aaKnown RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 CRYZL1O95825 349 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 NAT1P18440 290 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 RPL30P62888 115 aaKnown RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 TMEM267Q0VDI3 215 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 EIF4EBP1Q13541 118 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 MSMO1Q15800 293 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 BEAN1Q3B7T3 259 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 KPRPQ5T749 579 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 TMEM65Q6PI78 240 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 OSR1Q8TAX0 266 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 MYOZ3Q8TDC0 251 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 GIMAP1Q8WWP7 306 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 ARPC1AQ92747 370 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 KLK15Q9H2R5 256 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 FOXA2Q9Y261 457 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-217ENST00000592391 A3GALT2U3KPV4 340 aa11.34□□□□□ -0.59
DDX39A-217ENST00000592391 FCGR3BO75015 233 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 MYCNOSP40205 109 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 UBE2KP61086 200 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 PJVKQ0ZLH3 352 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 AKIRIN2Q53H80 203 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 OXLD1Q5BKU9 147 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 SNX29P2Q8IUI4 249 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-217ENST00000592391 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
DDX39A-217ENST00000592391 GPX8Q8TED1 209 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 RAB2BQ8WUD1 216 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 SECTM1Q8WVN6 248 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 P2RX4Q99571 388 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
DDX39A-217ENST00000592391 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 CCL28Q9NRJ3 127 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 EHFQ9NZC4 300 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 NOTCH3Q9UM47 2321 aa11.33□□□□□ -0.6
DDX39A-217ENST00000592391 A0A1W2PN81 502 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 FAM25AB3EWG3 89 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 FAM25CB3EWG5 89 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 FAM25GB3EWG6 89 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 CCL24O00175 119 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
DDX39A-217ENST00000592391 WIPF1O43516 503 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 SOX15O60248 233 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 IGLL1P15814 213 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 CHRNA7P36544 502 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 RPL5P46777 297 aaKnown RBP11.32□□□□□ -0.6
DDX39A-217ENST00000592391 RAB9AP51151 201 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 TMBIM6P55061 237 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 TAS2R46P59540 309 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 FXYD4P59646 89 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 GNB1P62873 340 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-217ENST00000592391 DYRK1AQ13627 763 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 KIAA0141Q14154 515 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-217ENST00000592391 FXYD3Q14802 87 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 SPCS2Q15005 226 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 ACTBL2Q562R1 376 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 OR2B11Q5JQS5 317 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 UNQ5815/PRO19632Q6UWF5 114 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 DHRS11Q6UWP2 260 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 MFSD4AQ8N468 514 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 ZBTB34Q8NCN2 500 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 OR5H2Q8NGV7 314 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 GRPEL2Q8TAA5 225 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 C4orf3Q8WVX3 66 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 TCTEX1D2Q8WW35 142 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
DDX39A-217ENST00000592391 RAX2Q96IS3 184 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 BCL7BQ9BQE9 202 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 DCUN1D5Q9BTE7 237 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 SLC5A7Q9GZV3 580 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 TAS2R8Q9NYW2 309 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 ADAM30Q9UKF2 790 aa11.32□□□□□ -0.6
DDX39A-217ENST00000592391 SULT1C2O00338 296 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 CNIH1O95406 144 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 PMP2P02689 132 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 RFX2P48378 723 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 HERV-K104P61576 105 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 MRGPRG-AS1Q2M3A8 158 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 LYSMD2Q8IV50 215 aa11.31□□□□□ -0.6
DDX39A-217ENST00000592391 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms