RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ZNF48Q96MX3 618 aaPredicted RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 GPHA2Q96T91 129 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 MS4A7Q9GZW8 240 aaPredicted RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 HILPDAQ9Y5L2 63 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
GCDH-213ENST00000590627 RBFOX2O43251 390 aaKnown RBP eCLIP13.33□□□□□ -0.288e-7■■□□□ 14.3
GCDH-213ENST00000590627 OR4E1P0C645 316 aa13.33□□□□□ -0.28
GCDH-213ENST00000590627 SUPT4H1P63272 117 aaKnown RBP13.33□□□□□ -0.28
GCDH-213ENST00000590627 C11orf88Q6PI97 169 aa13.33□□□□□ -0.28
GCDH-213ENST00000590627 SGPP2Q8IWX5 399 aa13.33□□□□□ -0.28
GCDH-213ENST00000590627 BCL6BQ8N143 479 aaPredicted RBP13.33□□□□□ -0.28
GCDH-213ENST00000590627 CAPSLQ8WWF8 208 aa13.33□□□□□ -0.28
GCDH-213ENST00000590627 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
GCDH-213ENST00000590627 MEGF9Q9H1U4 602 aa13.33□□□□□ -0.28
GCDH-213ENST00000590627 LIN7CQ9NUP9 197 aaKnown RBP13.33□□□□□ -0.28
GCDH-213ENST00000590627 A0A0U1RQK1 487 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 C3orf85A0A1B0GTC6 90 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 H0Y980 276 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 H0YJW9 148 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 PRAF2O60831 178 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 SFT2D2O95562 160 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 DHFRP00374 187 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 MC5RP33032 325 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 KIR2DS2P43631 304 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 RAB25P57735 213 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 BRWD1-AS2P59051 145 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 LINC00205P59089 165 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 PPP1R1AQ13522 171 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 OR51H1Q8NH63 302 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 CD300LFQ8TDQ1 290 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 TCTEX1D2Q8WW35 142 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 KCNIP3Q9Y2W7 256 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 PRELID3BQ9Y3B1 194 aa13.32□□□□□ -0.28
GCDH-213ENST00000590627 C9orf170A2RU37 121 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 VGLL3A8MV65 326 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 TIMM23O14925 209 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 RRASP10301 218 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 CD1BP29016 333 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 DYNLT3P51808 116 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 ARHGDIBP52566 201 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 DHRS2Q13268 280 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 SLC9A3R2Q15599 337 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 AANATQ16613 207 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 C4orf46Q504U0 113 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 GLDNQ6ZMI3 551 aaPredicted RBP13.31□□□□□ -0.28
GCDH-213ENST00000590627 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 CFHR4Q92496 578 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 TP53RKQ96S44 253 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 FAM96BQ9Y3D0 163 aa13.31□□□□□ -0.28
GCDH-213ENST00000590627 FAM90A9PA6NNJ1 464 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 APOA2P02652 100 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 FBP1P09467 338 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 OR5AC1P0C628 307 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 ANXA3P12429 323 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 UCP1P25874 307 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 RAB13P51153 203 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 DHRS7BQ6IAN0 325 aaPredicted RBP13.3□□□□□ -0.28
GCDH-213ENST00000590627 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 PDPNQ86YL7 162 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 SPAG16Q8N0X2 631 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 GLYATL2Q8WU03 294 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 TMEM222Q9H0R3 208 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 BEX1Q9HBH7 125 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 WASHC3Q9Y3C0 194 aa13.3□□□□□ -0.28
GCDH-213ENST00000590627 SOX21Q9Y651 276 aaPredicted RBP13.3□□□□□ -0.28
GCDH-213ENST00000590627 C7orf66A4D0T2 115 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 SNRPGP15A8MWD9 76 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 FCGR3BO75015 233 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 DUS4LO95620 317 aaKnown RBP13.29□□□□□ -0.28
GCDH-213ENST00000590627 HLA-AP01891 365 aaKnown RBP13.29□□□□□ -0.28
GCDH-213ENST00000590627 VAMP1P23763 118 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 BRS3P32247 399 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 EBI3Q14213 229 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 TMEM187Q14656 261 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 TATDN3Q17R31 274 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 RTL8BQ17RB0 113 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 TREML4Q6UXN2 200 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 Q6ZNX1 250 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 THNSL2Q86YJ6 484 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 OR4S2Q8NH73 311 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 ZNF431Q8TF32 576 aaPredicted RBP13.29□□□□□ -0.28
GCDH-213ENST00000590627 TMEM56Q96MV1 263 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
GCDH-213ENST00000590627 SLC35D1Q9NTN3 355 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
GCDH-213ENST00000590627 A0A0B4J293 547 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 A0A0B4J2A0 478 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 RAMP3O60896 148 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 CDS2O95674 445 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 SERPINE2P07093 398 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 RPA2P15927 270 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 PAX6P26367 422 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 SRPXP78539 464 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 DEFB112Q30KQ8 113 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 SP6Q3SY56 376 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 MITD1Q8WV92 249 aa13.28□□□□□ -0.28
GCDH-213ENST00000590627 RNF5Q99942 180 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms