RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 RSPO1Q2MKA7 263 aaPredicted RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 PHYHD1Q5SRE7 291 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 KIR3DL3Q8N743 410 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 C5orf17Q8NAS9 161 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 CHRDL1Q9BU40 450 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 GP6Q9HCN6 339 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 ASCC3Q8N3C0 2202 aaKnown RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 TRBV9A0A0B4J1U6 114 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 BLACEA4D250 179 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 FAM181BA6NEQ2 426 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 C9orf172C9J069 976 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 M0R135 149 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 HNRNPA1P09651 372 aaKnown RBP eCLIP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 PPIAL4GP0DN37 164 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 S100GP29377 79 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 SSTR5P35346 364 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 RBM11P57052 281 aaKnown RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 TRIP6Q15654 476 aaKnown RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 TNXAQ16473 311 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 PEAR1Q5VY43 1037 aaPredicted RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 C16orf47Q6ZP98 133 aaPredicted RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 ZNF799Q96GE5 643 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 TMEM147Q9BVK8 224 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 NPCDR1Q9BY65 106 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 FNDC4Q9H6D8 234 aaPredicted RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 ALKBH4Q9NXW9 302 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 PEF1Q9UBV8 284 aaKnown RBP6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 ATP23Q9Y6H3 246 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
NEDD4L-229ENST00000590506 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 M0R2Z0 102 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 TUSC2O75896 110 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 CLDN14O95500 239 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 TNFP01375 233 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 NPY1RP25929 384 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 OTX1P32242 354 aaPredicted RBP6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 UBE2G1P62253 170 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 DAZAP2Q15038 168 aaPredicted RBP6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 CNN3Q15417 329 aaKnown RBP6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 DCAF12Q5T6F0 453 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 TMEM14EPQ6UXP3 125 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 SLC37A2Q8TED4 501 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 LRRC61Q9BV99 259 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 MMP17Q9ULZ9 603 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 A0A1W2PNR3 127 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 LRP5LA4QPB2 252 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 CD5LO43866 347 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 EFNA2O43921 213 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 IGKV3-11P04433 115 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 CTSSP25774 331 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 ZNF542PQ5EBM4 170 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 WDR73Q6P4I2 378 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 TCF24Q7RTU0 167 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 BMFQ96LC9 184 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 ABI3Q9P2A4 366 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 PILRBQ9UKJ0 227 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 V9GYV3 84 aa6.5□□□□□ -1.37
NEDD4L-229ENST00000590506 SEC16AO15027 2179 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 A0A087X0K7 114 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 TNFSF15O95150 251 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 HAND1O96004 215 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 LINC00271P0C7V0 271 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 NTSR1P30989 418 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 RUNX3Q13761 415 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 FXYD3Q14802 87 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 TBR1Q16650 682 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 LSM10Q969L4 123 aaKnown RBP6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 STRADBQ9C0K7 418 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 HES4Q9HCC6 221 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 PPP1R3CQ9UQK1 317 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 PCDH15Q96QU1 1955 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 KNL1Q8NG31 2342 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 FAM231BA6NCW3 169 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 OR4C46A6NHA9 309 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 TMEM150CB9EJG8 249 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 HSBP1O75506 76 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 MT-ND6P03923 174 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 CELA2BP08218 269 aaPredicted RBP6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 LINC00869P0C866 280 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 AZU1P20160 251 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 GPR6P46095 362 aaPredicted RBP6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 EDDM3BP56851 147 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 SCGB2A2Q13296 93 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 GABRA6Q16445 453 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 HLA-BQ31612 363 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 SLC25A34Q6PIV7 304 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 C12orf54Q6X4T0 127 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 UBALD2Q8IYN6 164 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 PIP4P2Q8N4L2 257 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 GJC3Q8NFK1 279 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 OR8B3Q8NGG8 313 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 LMX1AQ8TE12 382 aa6.49□□□□□ -1.37
NEDD4L-229ENST00000590506 OR8B2Q96RD0 313 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms