RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 SLC35D1Q9NTN3 355 aa12.23□□□□□ -0.45
DDX39A-211ENST00000590239 SHPKQ9UHJ6 478 aa12.23□□□□□ -0.45
DDX39A-211ENST00000590239 WASHC3Q9Y3C0 194 aa12.23□□□□□ -0.45
DDX39A-211ENST00000590239 FAM96BQ9Y3D0 163 aa12.23□□□□□ -0.45
DDX39A-211ENST00000590239 ALG5Q9Y673 324 aa12.23□□□□□ -0.45
DDX39A-211ENST00000590239 TLN2Q9Y4G6 2542 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 A0A0U1RQK1 487 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 TIMM23O14925 209 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 FCGR3BO75015 233 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 CDS2O95674 445 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 FBP1P09467 338 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 CD1BP29016 333 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 DYNLT3P51808 116 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 CBX3Q13185 183 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 ZNF585BQ52M93 769 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 PDPNQ86YL7 162 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 LGI3Q8N145 548 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 LRTM2Q8N967 370 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 COQ8AQ8NI60 647 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 CASTOR1Q8WTX7 329 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 CFHR4Q92496 578 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 IL22RA2Q969J5 263 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 TMEM56Q96MV1 263 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 PHB2Q99623 299 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 MS4A7Q9GZW8 240 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-211ENST00000590239 MEGF9Q9H1U4 602 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 PLEKHA2Q9HB19 425 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
DDX39A-211ENST00000590239 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 H7C2Y5 167 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 RAMP3O60896 148 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 BRS3P32247 399 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 LPAR6P43657 344 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 AANATQ16613 207 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 ANKRD55Q3KP44 614 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 C12orf45Q8N5I9 185 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-211ENST00000590239 SMR3AQ99954 134 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 COMMD9Q9P000 198 aa12.21□□□□□ -0.45
DDX39A-211ENST00000590239 DUXBA0A1W2PPF3 345 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 ATG12O94817 140 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 VENTXO95231 258 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 HPRT1P00492 218 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 SRP14P37108 136 aaKnown RBP12.2□□□□□ -0.46
DDX39A-211ENST00000590239 TMEM177Q53S58 311 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 ZNF695Q8IW36 515 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 OSR1Q8TAX0 266 aaPredicted RBP12.2□□□□□ -0.46
DDX39A-211ENST00000590239 RBPMSQ93062 196 aaKnown RBP12.2□□□□□ -0.46
DDX39A-211ENST00000590239 AIFM2Q9BRQ8 373 aa12.2□□□□□ -0.46
DDX39A-211ENST00000590239 NIPBLQ6KC79 2804 aaeCLIP12.19□□□□□ -0.46
DDX39A-211ENST00000590239 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 SSNA1O43805 119 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 CRYZL1O95825 349 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 EBI3Q14213 229 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 TMEM268Q5VZI3 342 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 SELENOHQ8IZQ5 122 aaKnown RBP12.19□□□□□ -0.46
DDX39A-211ENST00000590239 OR4C13Q8NGP0 309 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 LHFPL5Q8TAF8 219 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 FLYWCH2Q96CP2 140 aaKnown RBP12.19□□□□□ -0.46
DDX39A-211ENST00000590239 RNF5Q99942 180 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
DDX39A-211ENST00000590239 DBX1A6NMT0 343 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 S1PR2O95136 353 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 MOSP00540 346 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 HRASP01112 189 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 IGKV1-39P01597 117 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 IGKV1-16P04430 117 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 IGKV1D-39P04432 117 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 PAX6P26367 422 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 LGALS7P47929 136 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 SCGB2A2Q13296 93 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 CADM3Q8N126 398 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 BCL6BQ8N143 479 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-211ENST00000590239 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 MED28Q9H204 178 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 PRDM13Q9H4Q3 707 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 RAB18Q9NP72 206 aa12.18□□□□□ -0.46
DDX39A-211ENST00000590239 SOX21Q9Y651 276 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-211ENST00000590239 SNRNP70P08621 437 aaKnown RBP12.17□□□□□ -0.46
DDX39A-211ENST00000590239 NQO2P16083 231 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 HLA-GP17693 338 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 VDAC1P21796 283 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 POU2AF1Q16633 256 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 TUSC1Q2TAM9 212 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 DEFB112Q30KQ8 113 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 LIN54Q6MZP7 749 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 IL17RELQ6ZVW7 336 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 UXS1Q8NBZ7 420 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 TSNAXQ99598 290 aaKnown RBP12.17□□□□□ -0.46
DDX39A-211ENST00000590239 CDC42EP3Q9UKI2 254 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 TMED3Q9Y3Q3 217 aa12.17□□□□□ -0.46
DDX39A-211ENST00000590239 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms