RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FAM201AQ5SY85 155 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 OR52W1Q6IF63 320 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 EIF5AL1Q6IS14 154 aaKnown RBP6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SLC25A47Q6Q0C1 308 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 LYPD2Q6UXB3 125 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SLC16A14Q7RTX9 510 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF101Q8IZC7 436 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 GVQW1Q8N7I0 195 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 CCDC54Q8NEL0 328 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 OR5D14Q8NGL3 314 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 OR4K15Q8NH41 348 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 KCNG3Q8TAE7 436 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 MARCH1Q8TCQ1 289 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 C11orf40Q8WZ69 217 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 DCUN1D4Q92564 292 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 EMG1Q92979 244 aaKnown RBP6.19□□□□□ -1.42
SMAD4-209ENST00000589941 FGGYQ96C11 551 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 CMBLQ96DG6 245 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SLAMF6Q96DU3 332 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 RTBDNQ9BSG5 229 aaPredicted RBP6.19□□□□□ -1.42
SMAD4-209ENST00000589941 ABHD14AQ9BUJ0 271 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SCRT1Q9BWW7 348 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 TM2D1Q9BX74 207 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SELENOIQ9C0D9 397 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 PBOV1Q9GZY1 135 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SIRPDQ9H106 197 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 TLNRD1Q9H1K6 362 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 TUBA4BQ9H853 241 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 TIMM10BQ9Y5J6 103 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 A0A1B0GW64 132 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF878C9JN71 531 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 F8W036 122 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SYT7O43581 403 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ANGPTL7O43827 346 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ACTL6BO94805 426 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 IFNA6P05013 189 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SERPINA5P05154 406 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 HLA-DOBP13765 273 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 MUC1P15941 1255 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 LAP3P28838 519 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 WNT5AP41221 380 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 KIR2DS4P43632 304 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 MEOX2P50222 304 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 TAS2R46P59540 309 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SELENOVP59797 346 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 TNFAIP6P98066 277 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 FAM3AP98173 230 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ATXN7L3Q14CW9 347 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ARL6IP1Q15041 203 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 LY6EQ16553 131 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 HIST3H3Q16695 136 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ANKRD55Q3KP44 614 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 LRRC37A5PQ49AS3 106 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SLC22A6Q4U2R8 563 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 AADACL3Q5VUY0 350 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 FOXL2NBQ6ZUU3 175 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 FAM57BQ71RH2 274 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ANGPTL5Q86XS5 388 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 CBLN2Q8IUK8 224 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 PNKDQ8N490 385 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 C15orf54Q8N8G6 183 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 NRACQ8N912 160 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 OR56B1Q8NGI3 324 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 OR4C13Q8NGP0 309 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 OR1J1Q8NGS3 322 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 OR13G1Q8NGZ3 307 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 GATAD1Q8WUU5 269 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ITLN1Q8WWA0 313 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SLC25A36Q96CQ1 311 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 MALSU1Q96EH3 234 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 NKX3-1Q99801 234 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SAV1Q9H4B6 383 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 RHOFQ9HBH0 211 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 CDH20Q9HBT6 801 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 SEPSECSQ9HD40 501 aaKnown RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 PNRC2Q9NPJ4 139 aaKnown RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 MLXQ9UH92 298 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 ATPIF1Q9UII2 106 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 MRPS28Q9Y2Q9 187 aaKnown RBP6.18□□□□□ -1.42
SMAD4-209ENST00000589941 STARD10Q9Y365 291 aa6.18□□□□□ -1.42
SMAD4-209ENST00000589941 A0A1W2PRD5 423 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 A0A1W2PRF3 423 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 A0A1W2PRM7 423 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 C5orf51A6NDU8 294 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 SERPINE3A8MV23 424 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM178BH3BS89 294 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 H3BSH0 61 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 ENSAO43768 121 aaKnown RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 FCN3O75636 299 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 CYB5R3P00387 301 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 CST4P01036 141 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 S100A8P05109 93 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 PGA4P0DJD7 388 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 PGA3P0DJD8 388 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 GNB3P16520 340 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 RCC1P18754 421 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF93P35789 620 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 LPAR6P43657 344 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF121P58317 390 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms