RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 FBXO7Q9Y3I1 522 aa11.14□□□□□ -0.63
MBD1-220ENST00000589758 MEIS3P1A6NDR6 274 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 LINC01619G3V211 115 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 FCN1O00602 326 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 OVOL1O14753 267 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 XRCC3O43542 346 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 PROP1O75360 226 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 APOA2P02652 100 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 ZNF182P17025 639 aaPredicted RBP11.13□□□□□ -0.63
MBD1-220ENST00000589758 TMBIM6P55061 237 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 NDPQ00604 133 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 PSG5Q15238 335 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 ACTBL2Q562R1 376 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 MZT2AQ6P582 158 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 ZNF429Q86V71 674 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 PPP1R27Q86WC6 154 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
MBD1-220ENST00000589758 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 GINS4Q9BRT9 223 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
MBD1-220ENST00000589758 METTL1Q9UBP6 276 aaKnown RBP11.13□□□□□ -0.63
MBD1-220ENST00000589758 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
MBD1-220ENST00000589758 KMT2CQ8NEZ4 4911 aaKnown RBP11.13□□□□□ -0.63
MBD1-220ENST00000589758 CCDC160A6NGH7 325 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 FAM25AB3EWG3 89 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 FAM25CB3EWG5 89 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 FAM25GB3EWG6 89 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 J3QRK9 145 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 ARPC1BO15143 372 aaKnown RBP11.12□□□□□ -0.63
MBD1-220ENST00000589758 SOX15O60248 233 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
MBD1-220ENST00000589758 EGR2P11161 476 aaPredicted RBP11.12□□□□□ -0.63
MBD1-220ENST00000589758 ELK1P19419 428 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 TAS2R20P59543 309 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
MBD1-220ENST00000589758 SRSF7Q16629 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
MBD1-220ENST00000589758 UNQ5815/PRO19632Q6UWF5 114 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 GVQW1Q8N7I0 195 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 ZNF383Q8NA42 475 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
MBD1-220ENST00000589758 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 AP3S1Q92572 193 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 CABLES2Q9BTV7 478 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 A3GALT2U3KPV4 340 aa11.12□□□□□ -0.63
MBD1-220ENST00000589758 TRBV6-7A0A0A0MS04 114 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 M0R1X1 148 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 DIRAS3O95661 229 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 LY86O95711 162 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 APOA1P02647 267 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 HSPB1P04792 205 aaKnown RBP11.11□□□□□ -0.63
MBD1-220ENST00000589758 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
MBD1-220ENST00000589758 Q6ZS49 121 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 ISOC1Q96CN7 298 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
MBD1-220ENST00000589758 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
MBD1-220ENST00000589758 U3KQK5 164 aa11.11□□□□□ -0.63
MBD1-220ENST00000589758 H3BMQ9 156 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 SAP30O75446 220 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 CA2P00918 260 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 OR8U9P0C7N5 309 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 TPPP2P59282 170 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 ARPC4P59998 168 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 SNX29P2Q8IUI4 249 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 LFNGQ8NES3 379 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 BEST4Q8NFU0 473 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 ARPC1AQ92747 370 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 DLX4Q92988 240 aaPredicted RBP11.1□□□□□ -0.63
MBD1-220ENST00000589758 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 BCL7BQ9BQE9 202 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 FAM103A1Q9BTL3 118 aaKnown RBP11.1□□□□□ -0.63
MBD1-220ENST00000589758 ALX4Q9H161 411 aaPredicted RBP11.1□□□□□ -0.63
MBD1-220ENST00000589758 OR2D2Q9H210 308 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 IFT46Q9NQC8 304 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 TPSG1Q9NRR2 321 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 ANXA10Q9UJ72 324 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 CEPT1Q9Y6K0 416 aa11.1□□□□□ -0.63
MBD1-220ENST00000589758 RGS5O15539 181 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 SLC25A17O43808 307 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 NFYAP23511 347 aaPredicted RBP11.09□□□□□ -0.63
MBD1-220ENST00000589758 LGALS7P47929 136 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 SLURP1P55000 103 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 CBX3Q13185 183 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 FXYD3Q14802 87 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 CNIH2Q6PI25 160 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 HOGA1Q86XE5 327 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 H1FOOQ8IZA3 346 aaPredicted RBP11.09□□□□□ -0.63
MBD1-220ENST00000589758 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 RHOVQ96L33 236 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 TMEM68Q96MH6 324 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
MBD1-220ENST00000589758 IGHV4OR15-8A0A075B7B6 117 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms