RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 FAM223AQ8IWN6 122 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 ADAD2Q8NCV1 583 aaKnown RBP10.6□□□□□ -0.71
VMP1-209ENST00000588915 OR10J5Q8NHC4 309 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 ADTRPQ96IZ2 230 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 CABLES2Q9BTV7 478 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 SLC2A8Q9NY64 477 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 LSM2Q9Y333 95 aaKnown RBP10.6□□□□□ -0.71
VMP1-209ENST00000588915 TRBV6-7A0A0A0MS04 114 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 TRBV9A0A0B4J1U6 114 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 FABP7O15540 132 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 TPPPO94811 219 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 CD3GP09693 182 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 PSMD7P51665 324 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 TRAM1Q15629 374 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 MRGPRG-AS1Q2M3A8 158 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
VMP1-209ENST00000588915 PHB2Q99623 299 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 NEURL2Q9BR09 285 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 ADAM30Q9UKF2 790 aa10.59□□□□□ -0.71
VMP1-209ENST00000588915 ZNF785A8K8V0 405 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 DENRO43583 198 aaKnown RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 TUSC2O75896 110 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 PSMA1P25786 263 aaKnown RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 CD81P60033 236 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 MED22Q15528 200 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 RAB11BQ15907 218 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 PRSS8Q16651 343 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 C2orf76Q3KRA6 126 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 PLAC9Q5JTB6 97 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 TMEM91Q6ZNR0 172 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 OSR1Q8TAX0 266 aaPredicted RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 UFD1Q92890 307 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 FAM3DQ96BQ1 224 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 GFI1Q99684 422 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 SPIN2AQ99865 258 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 SPIN2BQ9BPZ2 258 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 AKIP1Q9NQ31 210 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 TECRQ9NZ01 308 aaKnown RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 ZNF230Q9UIE0 474 aaPredicted RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
VMP1-209ENST00000588915 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
VMP1-209ENST00000588915 BMPR1BO00238 502 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 EBAG9O00559 213 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 BET1O15155 118 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 RBMXL2O75526 392 aaKnown RBP10.57□□□□□ -0.72
VMP1-209ENST00000588915 DUTP33316 252 aaKnown RBP10.57□□□□□ -0.72
VMP1-209ENST00000588915 RHOGP84095 191 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 TNXAQ16473 311 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 DEFB114Q30KQ6 69 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 CD300EQ496F6 205 aaPredicted RBP10.57□□□□□ -0.72
VMP1-209ENST00000588915 IGSF11Q5DX21 431 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 LIPKQ5VXJ0 399 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 TTC9CQ8N5M4 171 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 DDB2Q92466 427 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 PLEKHA3Q9HB20 300 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 SCN3BQ9NY72 215 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 RAB22AQ9UL26 194 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 KCNK7Q9Y2U2 307 aa10.57□□□□□ -0.72
VMP1-209ENST00000588915 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
VMP1-209ENST00000588915 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 LGALS9O00182 355 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 MPPED1O15442 326 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 ACTL6BO94805 426 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 FCGR3AP08637 254 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 GSTT2P0CG29 244 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 GSTT2BP0CG30 244 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 EXOSC2Q13868 293 aaKnown RBP10.56□□□□□ -0.72
VMP1-209ENST00000588915 IRF3Q14653 427 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 SSX1Q16384 188 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 Q6ZS49 121 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 SLC25A42Q86VD7 318 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 MMD2Q8IY49 270 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 NECAP1Q8NC96 275 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 TMEM203Q969S6 136 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 RAB3CQ96E17 227 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 ZC4H2Q9NQZ6 224 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 RBM7Q9Y580 266 aaKnown RBP10.56□□□□□ -0.72
VMP1-209ENST00000588915 V9GY05 133 aa10.56□□□□□ -0.72
VMP1-209ENST00000588915 RBMY1BA6NDE4 496 aaKnown RBP10.55□□□□□ -0.72
VMP1-209ENST00000588915 RBMY1EA6NEQ0 496 aaKnown RBP10.55□□□□□ -0.72
VMP1-209ENST00000588915 OR11H12B2RN74 326 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 CASQ2O14958 399 aaPredicted RBP10.55□□□□□ -0.72
VMP1-209ENST00000588915 RBMY1DP0C7P1 496 aaKnown RBP10.55□□□□□ -0.72
VMP1-209ENST00000588915 APELAP0DMC3 54 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 GADD45AP24522 165 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 MAP2K4P45985 399 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 DEFA5Q01523 94 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 ZNF45Q02386 682 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 OGFRL1Q5TC84 451 aaPredicted RBP10.55□□□□□ -0.72
VMP1-209ENST00000588915 DYNLRB2Q8TF09 96 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 ACOT12Q8WYK0 555 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 C5orf30Q96GV9 206 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 RETNQ9HD89 108 aa10.55□□□□□ -0.72
VMP1-209ENST00000588915 ZNF257Q9Y2Q1 563 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms