RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CMTM1Q8IZ96 169 aa15.09■□□□□ 0.01
CLPTM1-209ENST00000588855 OR51H1Q8NH63 302 aa15.09■□□□□ 0.01
CLPTM1-209ENST00000588855 FLYWCH2Q96CP2 140 aaKnown RBP15.09■□□□□ 0.01
CLPTM1-209ENST00000588855 RANBP3Q9H6Z4 567 aaPredicted RBP15.09■□□□□ 0.01
CLPTM1-209ENST00000588855 ZNF702PQ9H963 129 aa15.09■□□□□ 0.01
CLPTM1-209ENST00000588855 LINC00854A0A1B0GVQ3 168 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 M0QZK8 103 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 NBR2O15453 112 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 TSPAN9O75954 239 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 CRYZL1O95825 349 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 RRASP10301 218 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 CD40LGP29965 261 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 CATR1Q13166 79 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 CBX3Q13185 183 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 FAM71E2Q8N5Q1 922 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 OR8H1Q8NGG4 311 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 DEDD2Q8WXF8 326 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 CCDC32Q9BV29 185 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 SLC2A9Q9NRM0 540 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 SCP2D1Q9UJQ7 156 aa15.08■□□□□ 0.01
CLPTM1-209ENST00000588855 TENM1Q9UKZ4 2725 aa15.08■□□□□ 0
CLPTM1-209ENST00000588855 RPS16P62249 146 aaKnown RBP15.07■□□□□ 0
CLPTM1-209ENST00000588855 TMEM177Q53S58 311 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 NPBQ8NG41 125 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 HARBI1Q96MB7 349 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 MDFIQ99750 246 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 PRSS22Q9GZN4 317 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 SIGLEC9Q9Y336 463 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 TMEM89A2RUT3 159 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 NDUFA3O95167 84 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 MDKP21741 143 aaPredicted RBP15.07■□□□□ 0
CLPTM1-209ENST00000588855 ECI1P42126 302 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 TBC1D26Q86UD7 250 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 SPAG16Q8N0X2 631 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 OR4F5Q8NH21 305 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 OR4S2Q8NH73 311 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 ZNF486Q96H40 463 aaPredicted RBP15.07■□□□□ 0
CLPTM1-209ENST00000588855 RNF5Q99942 180 aa15.07■□□□□ 0
CLPTM1-209ENST00000588855 SHOXO15266 292 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 RAMP3O60896 148 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 KIR2DS2P43631 304 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 SURF2Q15527 256 aaPredicted RBP15.06■□□□□ 0
CLPTM1-209ENST00000588855 KRTAP21-3Q3LHN1 58 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 C9orf152Q5JTZ5 239 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 LINC01006Q8NI28 216 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 ZFAND1Q8TCF1 268 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 TSNAXQ99598 290 aaKnown RBP15.06■□□□□ 0
CLPTM1-209ENST00000588855 FBXL15Q9H469 300 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 C16orf95Q9H693 158 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 LIN7CQ9NUP9 197 aaKnown RBP15.06■□□□□ 0
CLPTM1-209ENST00000588855 KIAA1456Q9P272 454 aa15.06■□□□□ 0
CLPTM1-209ENST00000588855 RRHO14718 337 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 IGLV2-23P01705 113 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 CTSDP07339 412 aaPredicted RBP15.05■□□□□ -0
CLPTM1-209ENST00000588855 S100GP29377 79 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 PIGPP57054 158 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 RND3P61587 244 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 PSG5Q15238 335 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 C5orf64Q2M2E5 130 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 TMEM95Q3KNT9 176 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 Q8N2B8 174 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 OSR1Q8TAX0 266 aaPredicted RBP15.05■□□□□ -0
CLPTM1-209ENST00000588855 RASL11BQ9BPW5 248 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 C5orf66Q9H5L9 145 aa15.05■□□□□ -0
CLPTM1-209ENST00000588855 SRRM4A7MD48 611 aaKnown RBP15.04■□□□□ -0
CLPTM1-209ENST00000588855 SLC25A17O43808 307 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 SPDEFO95238 335 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 VSIG10L2P0DP72 767 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 F2RP25116 425 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 FOXL1Q12952 345 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 OR2T6Q8NHC8 308 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 RTBDNQ9BSG5 229 aaPredicted RBP15.04■□□□□ -0
CLPTM1-209ENST00000588855 TPSG1Q9NRR2 321 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 METTL1Q9UBP6 276 aaKnown RBP15.04■□□□□ -0
CLPTM1-209ENST00000588855 GPR132Q9UNW8 380 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 C14orf166Q9Y224 244 aaKnown RBP15.04■□□□□ -0
CLPTM1-209ENST00000588855 VSIG4Q9Y279 399 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 PLXNB1O43157 2135 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 ANK2Q01484 3957 aa15.04■□□□□ -0
CLPTM1-209ENST00000588855 NAP1L6A6NFF2 107 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 PLA2G10O15496 165 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 RBFOX2O43251 390 aaKnown RBP eCLIP15.03■□□□□ -0
CLPTM1-209ENST00000588855 BTCP35070 178 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 LGALS7P47929 136 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 CCR6P51684 374 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 AWAT1Q58HT5 328 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 ARSJQ5FYB0 599 aaPredicted RBP15.03■□□□□ -0
CLPTM1-209ENST00000588855 POC5Q8NA72 575 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 HSPB9Q9BQS6 159 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 C7orf50Q9BRJ6 194 aaKnown RBP15.03■□□□□ -0
CLPTM1-209ENST00000588855 BEX1Q9HBH7 125 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 COPZ2Q9P299 210 aa15.03■□□□□ -0
CLPTM1-209ENST00000588855 CLPSL1A2RUU4 121 aa15.02■□□□□ -0
CLPTM1-209ENST00000588855 MPPED1O15442 326 aa15.02■□□□□ -0
CLPTM1-209ENST00000588855 PLGLAQ15195 96 aa15.02■□□□□ -0
CLPTM1-209ENST00000588855 CCDC71LQ8N9Z2 235 aa15.02■□□□□ -0
CLPTM1-209ENST00000588855 SERTAD4Q9NUC0 356 aa15.02■□□□□ -0
CLPTM1-209ENST00000588855 STAB1Q9NY15 2570 aa15.02□□□□□ -0.01
CLPTM1-209ENST00000588855 CENPXA8MT69 81 aa15.02□□□□□ -0.01
CLPTM1-209ENST00000588855 UPK1BO75841 260 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms