RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 BATF3Q9NR55 127 aa12.58□□□□□ -0.4
RETREG3-206ENST00000588423 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
RETREG3-206ENST00000588423 H3BMQ9 156 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 SHOXO15266 292 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 SLC25A17O43808 307 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 NOL3O60936 208 aaKnown RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 CA2P00918 260 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 IGLV1-40P01703 118 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 PF4P02776 101 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 CDX1P47902 265 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 TAS2R46P59540 309 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 SPCS2Q15005 226 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 DHRS11Q6UWP2 260 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 DGCR14Q96DF8 476 aaKnown RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 MRPS7Q9Y2R9 242 aaKnown RBP12.57□□□□□ -0.4
RETREG3-206ENST00000588423 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
RETREG3-206ENST00000588423 SRRM4A7MD48 611 aaKnown RBP12.56□□□□□ -0.4
RETREG3-206ENST00000588423 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 G3V318 75 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 FCER2P06734 321 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 EGR2P11161 476 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-206ENST00000588423 DYRK1AQ13627 763 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 ZNF695Q8IW36 515 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 TEX45Q8NA69 505 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 SECTM1Q8WVN6 248 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 TPSG1Q9NRR2 321 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 EHFQ9NZC4 300 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 FBXO7Q9Y3I1 522 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 WSB1Q9Y6I7 421 aa12.56□□□□□ -0.4
RETREG3-206ENST00000588423 CRYZL1O95825 349 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 RCVRNP35243 200 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 MYCNOSP40205 109 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 UBE2KP61086 200 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 RPL30P62888 115 aaKnown RBP12.55□□□□□ -0.4
RETREG3-206ENST00000588423 VMA21Q3ZAQ7 101 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 SNX29P2Q8IUI4 249 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 KLHL30-AS1Q8NEE0 82 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 DYNC2LI1Q8TCX1 351 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 C15orf40Q8WUR7 153 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 ARPC1AQ92747 370 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
RETREG3-206ENST00000588423 CCDC59Q9P031 241 aaKnown RBP12.55□□□□□ -0.4
RETREG3-206ENST00000588423 CCDC160A6NGH7 325 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 FCGR3BO75015 233 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 CD33P20138 364 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 KIR2DS2P43631 304 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 RFX2P48378 723 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 FXYD3Q14802 87 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 ECSCRQ19T08 205 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 FOXB2Q5VYV0 432 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 PYHIN1Q6K0P9 492 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 ETV3LQ6ZN32 361 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 C18orf65Q6ZTR6 163 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 C8orf86Q6ZUL3 223 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 LYSMD2Q8IV50 215 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 OR4S2Q8NH73 311 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 MOB3AQ96BX8 217 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 SLC5A7Q9GZV3 580 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 CCL28Q9NRJ3 127 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 EXTL2Q9UBQ6 330 aa12.54□□□□□ -0.4
RETREG3-206ENST00000588423 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
RETREG3-206ENST00000588423 A0A1W2PN81 502 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 ARPC1BO15143 372 aaKnown RBP12.53□□□□□ -0.4
RETREG3-206ENST00000588423 CREBL2O60519 120 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-206ENST00000588423 PMP2P02689 132 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 HRH1P35367 487 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 CHRNA7P36544 502 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 RAB9AP51151 201 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 FXYD4P59646 89 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 HERV-K104P61576 105 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 SSBP2P81877 361 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-206ENST00000588423 KPRPQ5T749 579 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-206ENST00000588423 LCNL1Q6ZST4 164 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 ABHD5Q8WTS1 349 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 TMEM68Q96MH6 324 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 P2RX4Q99571 388 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 ZNF2Q9BSG1 426 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-206ENST00000588423 DCUN1D5Q9BTE7 237 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 MIXL1Q9H2W2 232 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 TAS2R8Q9NYW2 309 aa12.53□□□□□ -0.4
RETREG3-206ENST00000588423 G3V4G9 280 aa12.52□□□□□ -0.41
RETREG3-206ENST00000588423 RBFOX2O43251 390 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms